ggKbase home page

13_1_40cm_scaffold_25767

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_25767_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3..197
DNA (195bp) protein (65aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Glycosyl transferase, group 1 id=4681940 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyltransferase
13_1_40cm_scaffold_25767_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

194..604
DNA (411bp) protein (137aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4534447 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_25767_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

604..1008
DNA (405bp) protein (135aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=GWA2_Rokubacteria_73_35_curated
6-carboxy-5,6,7,8-tetrahydropterin synthase id=4681942 bin=GWA2_Methylomirabilis_73_35 species=Gracilibacillus halophilus genus=Gracilibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_25767_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1005..2576
DNA (1572bp) protein (524aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16) Tax=GWA2_Rokubacteria_73_35_curated
GTP cyclohydrolase I id=4139273 bin=GWF2_Methylomirabilis_70_14 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Hypothetical protein
13_1_40cm_scaffold_25767_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2573..3304
DNA (732bp) protein (244aa)
short chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
GTP cyclohydrolase I id=4681943 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short chain dehydrogenase
13_1_40cm_scaffold_25767_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3358..3684
DNA (327bp) protein (109aa)
iscA; iron-binding protein IscA (iron-sulfur cluster assembly protein) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Iron-binding protein IscA (Iron-sulfur cluster assembly protein) id=4681944 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
iscA; iron-binding protein IscA (iron-sulfur cluster assembly protein)
13_1_40cm_scaffold_25767_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3699..4370
DNA (672bp) protein (224aa)
moaDE; molybdopterin converting factor, subunits 1/2; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
molybdopterin converting factor subunit 1; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] id=14626372 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
MoaD family protein
13_1_40cm_scaffold_25767_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4375..5748
DNA (1374bp) protein (458aa)
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATPase; tRNA(Ile)-lysidine synthase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase id=4681946 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_25767_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5770..6534
DNA (765bp) protein (255aa)
degQ; protease degQ (EC:3.4.21.-); K04772 serine protease DegQ [EC:3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
protease Do (EC:3.4.21.108)
Protease Do id=4681947 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 9 items

View Taxonomy