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13_1_40cm_scaffold_4663

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4663_1
unknown

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2..127
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_scaffold_4663_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(161..1696)
DNA (1536bp) protein (512aa)
Glycosyl transferase, group 2 family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glycosyl transferase, group 2 family protein id=3975791 bin=GWA2_Methylomirabilis_73_35 species=Labrenzia alexandrii genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_4663_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1713..2009)
DNA (297bp) protein (99aa)
Septum formation initiator family protein id=3975793 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
septum formation initiator; K13052 cell division protein DivIC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
divIC; septum formation initiator family protein
13_1_40cm_scaffold_4663_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1991..3295)
DNA (1305bp) protein (435aa)
phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Enolase id=3975795 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
eno; phosphopyruvate hydratase
13_1_40cm_scaffold_4663_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3297..4193)
DNA (897bp) protein (299aa)
polyprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Polyprenyl synthetase id=3975797 bin=GWA2_Methylomirabilis_73_35 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
trans-isoprenyl diphosphate synthase
13_1_40cm_scaffold_4663_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(4190..4429)
DNA (240bp) protein (80aa)
Exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
exodeoxyribonuclease VII, small subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Exodeoxyribonuclease 7 small subunit id=3975799 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_4663_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4410..5699)
DNA (1290bp) protein (430aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=GWA2_Rokubacteria_73_35_curated
exodeoxyribonuclease VII large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] id=14627995 bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
exodeoxyribonuclease VII large subunit
13_1_40cm_scaffold_4663_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5696..6613)
DNA (918bp) protein (306aa)
Methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] Tax=GWA2_Rokubacteria_73_35_
Bifunctional protein FolD id=3975803 bin=GWA2_Methylomirabilis_73_35 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
5, 10-methylenetetrahydrofolate dehydrogenase (NADP+), methenyltetrahydrofolate cyclohydrolase
13_1_40cm_scaffold_4663_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6621..7397)
DNA (777bp) protein (259aa)
metallophosphoesterase; K09769 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Metallophosphoesterase id=3975805 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metallophosphoesterase
13_1_40cm_scaffold_4663_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7403..7921)
DNA (519bp) protein (173aa)
Ribonuclease Y id=3975867 bin=GWA2_Methylomirabilis_73_35 species=Phascolarctobacterium succinatutens genus=Phascolarctobacterium taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphodiesterase; K06950 uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
phosphodiesterase
13_1_40cm_scaffold_4663_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7918..8922)
DNA (1005bp) protein (335aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribonuclease Y id=4039892 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Displaying 11 items

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