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13_1_40cm_scaffold_5509

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_5509_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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2..877
DNA (876bp) protein (292aa)
thiI; thiamine biosynthesis protein thiI Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Probable tRNA sulfurtransferase id=4621862 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiI; thiamine biosynthesis protein thiI
13_1_40cm_scaffold_5509_2
bacterium YEK0313, Bacteria

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1001..2290
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E66A0
Esterase EstB {ECO:0000313|EMBL:CEJ15156.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
beta-lactamase
13_1_40cm_scaffold_5509_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2415..2885
DNA (471bp) protein (157aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=GWA2_Rokubacteria_73_35_curated
Sugar-phosphate isomerase, RpiB/LacA/LacB family id=4621857 bin=GWA2_Methylomirabilis_73_35 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribose 5-phosphate isomerase B
13_1_40cm_scaffold_5509_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2869..4116
DNA (1248bp) protein (416aa)
glyA; Serine hydroxymethyltransferase (glyA) (EC:2.1.2.1) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase id=4621854 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_5509_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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4169..4639
DNA (471bp) protein (157aa)
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Transcriptional repressor NrdR id=3366426 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
nrdR; NrdR family transcriptional regulator
13_1_40cm_scaffold_5509_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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5004..6821
DNA (1818bp) protein (606aa)
cobalamin B12-binding/Radical SAM family protein id=14627517 bin=bin7_NC10_sister species=Leptospirillum ferriphilum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
cobalamin B12-binding/Radical SAM family protein Tax=CSP1_6_Rokubacteria
cobalamin B12-binding/Radical SAM family
13_1_40cm_scaffold_5509_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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8072..8542
DNA (471bp) protein (157aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rimI; ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] id=14627522 bin=bin7_NC10_sister species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
rimI; putative ribosomal-protein-alanine acetyltransferase RimI (EC:2.3.1.128)
13_1_40cm_scaffold_5509_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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8603..9418
DNA (816bp) protein (272aa)
id=3877323 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
id=3877323 Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_5509_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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9594..10052
DNA (459bp) protein (153aa)
id=3366415 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=3366415 Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_5509_10
unknown

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comp(10061..10432)
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_scaffold_5509_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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10505..10687
DNA (183bp) protein (61aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
LAO/AO transport system ATPase id=2982090 bin=GWC2_Methylomirabilis_70_16 species=uncultured marine microorganism HF4000_APKG10K24 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Displaying 11 items

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