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13_1_40cm_scaffold_68335

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_68335_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3..773)
DNA (771bp) protein (257aa)
formyl-CoA transferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Acyl-CoA synthase id=4424332 bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_68335_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(773..1660)
DNA (888bp) protein (296aa)
Putative uncharacterized protein id=4748154 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
abhydrolase 1 Tax=GWA2_Rokubacteria_70_23_curated
alpha/beta hydrolase fold protein
13_1_40cm_scaffold_68335_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1675..2154)
DNA (480bp) protein (160aa)
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcription elongation factor GreA id=3635558 bin=GWC2_Methylomirabilis_70_16 species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Transcription elongation factor greA
13_1_40cm_scaffold_68335_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2179..4074)
DNA (1896bp) protein (632aa)
peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidylprolyl cis-trans isomerase, putative id=4433399 bin=GWC2_Methylomirabilis_70_16 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_68335_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4081..4653)
DNA (573bp) protein (191aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] Tax=GWA2_Rokubacteria_73_35_curated
tRNA (Adenine-N(1)-)-methyltransferase id=4549106 bin=GWA2_Methylomirabilis_73_35 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA (adenine-N(1)-)-methyltransferase
13_1_40cm_scaffold_68335_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(4958..5620)
DNA (663bp) protein (221aa)
arabinose efflux permease family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
fosmidomycin resistance protein; K08223 MFS transporter, FSR family, fosmidomycin resistance protein id=14625329 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
major facilitator transporter
13_1_40cm_scaffold_68335_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

6134..6505
DNA (372bp) protein (124aa)
putative glyoxalase; K07104 Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
putative glyoxalase; K07104 id=14625328 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
Displaying 7 items

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