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13_1_40cm_scaffold_71849

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_71849_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2..457
DNA (456bp) protein (152aa)
membrane-associated protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SNARE associated Golgi protein-like protein id=2913053 bin=GWC2_Methylomirabilis_70_16 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
membrane-associated protein
13_1_40cm_scaffold_71849_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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483..1781
DNA (1299bp) protein (433aa)
integral membrane sensor signal transduction histidine kinase Tax=GWC2_Rokubacteria_70_16_curated
Integral membrane sensor signal transduction histidine kinase id=3014939 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
integral membrane sensor signal transduction histidine kinase
13_1_40cm_scaffold_71849_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1774..3153
DNA (1380bp) protein (460aa)
sigma-54 dependent DNA-binding response regulator; K07713 two-component system, NtrC family, response regulator HydG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=1884909 bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fis family transcriptional regulator
13_1_40cm_scaffold_71849_4
Streptomyces sp. SA3_actF, Streptomyces, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(3117..3929)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Streptomyces sp. SA3_actF RepID=UPI0002000142
13_1_40cm_scaffold_71849_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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4262..5050
DNA (789bp) protein (263aa)
yutF; p-nitrophenylphosphatase (EC:3.1.3.41)
phosphotransferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Probable phosphotransferase id=1884917 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_71849_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5113..5586
DNA (474bp) protein (158aa)
putative twin-arginine translocation protein TatB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sec-independent protein translocase protein TatA id=1884921 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. RS9917 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative twin-arginine translocation protein TatB
13_1_40cm_scaffold_71849_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5657..5875
DNA (219bp) protein (73aa)
SOS-response transcriptional repressor, LexA (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] id=14627992 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
LexA family transcriptional regulator (EC:3.4.21.88)
LexA repressor Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 7 items

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