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13_1_40cm_scaffold_10835

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_10835_1
unknown

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comp(1..84)
DNA (84bp) protein (28aa)

This feature has no annotations

13_1_40cm_scaffold_10835_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1429..1560
DNA (132bp) protein (44aa)
aldehyde:ferredoxin oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aldehyde ferredoxin oxidoreductase id=4737971 bin=GWA2_Methylomirabilis_73_35 species=uncultured marine crenarchaeote E48-1C genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_10835_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1717..2601
DNA (885bp) protein (295aa)
2-hydroxy-3-oxopropionate reductase; K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] Tax=GWA2_Rokubacteria_73_35_curated
2-hydroxy-3-oxopropionate reductase id=4931803 bin=GWC2_Methylomirabilis_70_16 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
2-hydroxy-3-oxopropionate reductase
13_1_40cm_scaffold_10835_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2598..3629
DNA (1032bp) protein (344aa)
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative acetyltransferase id=4737960 bin=GWA2_Methylomirabilis_73_35 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GCN5-related N-acetyltransferase
13_1_40cm_scaffold_10835_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3626..3988
DNA (363bp) protein (121aa)
Putative Copper resistance protein, copC family id=4737956 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
copper resistance protein CopC; K07156 Tax=GWA2_Rokubacteria_73_35_curated
copper resistance protein CopC
13_1_40cm_scaffold_10835_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4039..5163
DNA (1125bp) protein (375aa)
Predicted protein id=2216088 bin=GWA2_Methylomirabilis_73_35 species=Physcomitrella patens genus=Physcomitrella taxon_order=Funariales taxon_class=Bryopsida phylum=Streptophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
NADP-dependent oxidoreductase domain protein
13_1_40cm_scaffold_10835_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5212..5670
DNA (459bp) protein (153aa)
HAD-superfamily hydrolase (EC:3.1.3.41 3.6.1.22) Tax=GWA2_Rokubacteria_73_35_curated
HAD-superfamily hydrolase, subfamily IIA id=2216087 bin=GWA2_Methylomirabilis_73_35 species=Dethiosulfovibrio peptidovorans genus=Dethiosulfovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_10835_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5685..6434
DNA (750bp) protein (250aa)
methylmalonyl-CoA epimerase (EC:4.4.1.5); K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Lactoylglutathione lyase and related lyases id=2216086 bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium HF0200_09I09 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative methylmalonyl-CoA epimerase
13_1_40cm_scaffold_10835_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7263..8936)
DNA (1674bp) protein (558aa)
malate synthase A (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=GWA2_Rokubacteria_73_35_curated
aceB; Malate synthase (EC:2.3.3.9)
putative malate synthase id=14626776 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_10835_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9047..9358
DNA (312bp) protein (104aa)
Putative uncharacterized protein id=2216080 bin=GWA2_Methylomirabilis_73_35 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_10835_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9379..9765
DNA (387bp) protein (129aa)
hypothetical protein id=2216079 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_10835_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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9765..10067
DNA (303bp) protein (101aa)
Antibiotic biosynthesis monooxygenase id=2216078 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
antibiotic biosynthesis monooxygenase Tax=GWA2_Rokubacteria_73_35_curated
antibiotic biosynthesis monooxygenase
13_1_40cm_scaffold_10835_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(10046..10696)
DNA (651bp) protein (217aa)
Major facilitator superfamily MFS_1 id=2216074 bin=GWA2_Methylomirabilis_73_35 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily protein Tax=GWA2_Rokubacteria_73_35_curated
major facilitator superfamily protein
Displaying 13 items

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