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13_1_40cm_scaffold_15520_6

Organism: 13_1_40CM_Rokubacteria_69_96

partial RP 40 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38
Location: 4191..5363

Top 3 Functional Annotations

Value Algorithm Source
pilC; type 4 fimbrial assembly protein pilC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 400.0
  • Bit_score: 632
  • Evalue 3.60e-178
Type 4 fimbrial assembly protein pilC id=4686861 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 401.0
  • Bit_score: 506
  • Evalue 2.10e-140
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 401.0
  • Bit_score: 404
  • Evalue 3.20e-110

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1173
ATGCCCGTCTTCGCGTATCGTGGCCGGTCGGGCGCGGGAGTCGTCGCCGGCGAGATCGAGGCCGACGATCGGCCCGGGGCCGTCGCACAGCTGCGGGCGAAAGGCGTCATCGCGACGTCGGTTCAGGAGCGCCAAGCCAAGGCCGCGGCCGTCAAGAAAATCGGCGGCTCCGTCAAGGACAAGGACCTCGCGATCTATACACGCCAGTTCTCCACGATGGTCGACGCCGGCCTGCCGATCGCTCAGTGCCTCTCGATTCTGTCGGAGCAGAGCGACTCCAAGACCCTGCGCGACGTCACGAAGCGCATCACGACCGAAGTCGAGGGCGGCGCCACCCTCGCGGAGTCGTTCAAGAAGTACCCGAGGGTGTTCAACGATCTCTTCGTCAACATGCTCGCGGTCGGCGAGTCCGGCGGTGTCCTCGACGTCGTCCTGCAGCGGCTGTCCGGCTACATCGAGAAGGCCGCCAAGCTGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCATGATGATCTTCGTCATCCCGACCTTCGCCAAGATGTTCCAGGGCCTCGGCGCCGACCTCCCGGTGCCCACCCGGATCGTCATGTTCCTTTCCGATTTCACGCAGCGATACATCGTCGTCATGGTGATCGCGGGTGCGGGCGCGATCTACGCGCTCAAGCGCTACTACGCGACCGACCAGGGCAGCAAGGTCATCGACGCGTTCCTCCTGAAGGTGCCGGTCATCGGCATGCTGATCCGCAAGGTCGCCGTCGCGCGGTTCACACGCACGCTCGGCACGCTCATCTCGTCTGGCGTTCCCATCCTCGAGGGGCTTCTCATCACGGCGCGGTCGGCCGGCAACCGCGTCGTCGAGGCCACCGTGATGCAGGCGCGCACGGCCGTCACCTCGGGCCGCACGCTGTCGGAGCCGCTGAAGGGGAGCACCGTGTTTCCCCCGATGGTCGTGCACATGATCAGCGTGGGCGAGAACACGGGCGCCCTCGACCAGATGCTCCAGAAGATCGCCGACTTCTACGACGACGAGGTCGACACCGCCGTGGGCGCGCTCACCGCGCTGCTCGAGCCGATGATGATCGTATTCCTCGGCGTCGTCGTCGGCGGTCTCGTCGTGGCCATGTATCTGCCGATCTTCAAGCTGGTCACGATAATGAAGTAG
PROTEIN sequence
Length: 391
MPVFAYRGRSGAGVVAGEIEADDRPGAVAQLRAKGVIATSVQERQAKAAAVKKIGGSVKDKDLAIYTRQFSTMVDAGLPIAQCLSILSEQSDSKTLRDVTKRITTEVEGGATLAESFKKYPRVFNDLFVNMLAVGESGGVLDVVLQRLSGYIEKAAKLKXXXXXXXXXXXXFMMIFVIPTFAKMFQGLGADLPVPTRIVMFLSDFTQRYIVVMVIAGAGAIYALKRYYATDQGSKVIDAFLLKVPVIGMLIRKVAVARFTRTLGTLISSGVPILEGLLITARSAGNRVVEATVMQARTAVTSGRTLSEPLKGSTVFPPMVVHMISVGENTGALDQMLQKIADFYDDEVDTAVGALTALLEPMMIVFLGVVVGGLVVAMYLPIFKLVTIMK*