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13_1_40cm_scaffold_21593_5

Organism: 13_1_40CM_Rokubacteria_69_96

partial RP 40 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38
Location: 5078..5755

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_ similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 226.0
  • Bit_score: 375
  • Evalue 4.60e-101
Two component, sigma54 specific, transcriptional regulator, Fis family id=2085290 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 226.0
  • Bit_score: 373
  • Evalue 1.60e-100
sigma-54-dependent transcriptional response regulator similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 221.0
  • Bit_score: 277
  • Evalue 3.40e-72

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGGCCGGCGAGCACATCTTAATCGTCGACGACGAGCCCGGGATCCAGGCGACGCTGCGCGGCGTGTTGGAGGACGAGGGCTACCGCGTGACCGCCGTCGGCAGCGGCGCCGACGCGCTCCGGGTCGTCGCCGACGAGTCACCCGACCTCACCTTTCTCGACATCTGGATGGAGCGCATGGACGGCCTCGAGACGCTCGCCGAGATCAAGCGCACCCGTCCCGACGCGATCGTCGTGATGATCTCCGGGCACGGCACGATCGAGACCGCGGTGAAGGCCACCAAGCTCGGCGCGTACGACTTCATCGAGAAGCCGCTCTCCCTCGAGAAGACGCTGCTCATCGTCACCCGGGCGCTCGAGCACGCGCGGCTGGCCCGCGAGAACGCCGCGCTCCGCGAGAGCCTCGCCGGGCGCGCCGAGATCATCGGCGAGAGCGAGCCGGTCCGCCGGCTCCGCGAGCAGATCGTCACCGCCGCCCCGACGACCGGCCGCGTGCTGATCCGGGGCGAGAACGGCAGCGGCAAGGAGCTGGTGGCCCGCGCCGTCCACGCCCGGTCGGCGCGGCGCGAGCAGCCGTTCGTCGAGGTCAACTGCGCCGCGATCCCGGACGAGCTGATCGAGTCCGAGCTGTTCGGCCACGAGAAGGGCGCCTTCACGGGCGCGCTCGCGCGCCGCCGC
PROTEIN sequence
Length: 226
MAGEHILIVDDEPGIQATLRGVLEDEGYRVTAVGSGADALRVVADESPDLTFLDIWMERMDGLETLAEIKRTRPDAIVVMISGHGTIETAVKATKLGAYDFIEKPLSLEKTLLIVTRALEHARLARENAALRESLAGRAEIIGESEPVRRLREQIVTAAPTTGRVLIRGENGSGKELVARAVHARSARREQPFVEVNCAAIPDELIESELFGHEKGAFTGALARRR