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13_1_40cm_scaffold_21593

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_21593_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..537
DNA (537bp) protein (179aa)
hypothetical protein; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribosomal RNA small subunit methyltransferase E id=2287874 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_21593_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1302..2117
DNA (816bp) protein (272aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] Tax=GWA2_Rokubacteria_73_35_curated
lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase id=2287875 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium HF0770_27F21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_21593_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2165..2731
DNA (567bp) protein (189aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2287876 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_21593_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2731..4959
DNA (2229bp) protein (743aa)
ntrY; nitrogen regulation sensor histidine kinase NtrY, HAMP and PAS domain-containing; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] Tax=RIF
nitrogen regulation protein NtrY; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] id=14625170 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
multi-sensor signal transduction histidine kinase
13_1_40cm_scaffold_21593_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5078..5755
DNA (678bp) protein (226aa)
two component, sigma54 specific, Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_
Two component, sigma54 specific, transcriptional regulator, Fis family id=2085290 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sigma-54-dependent transcriptional response regulator
Displaying 5 items

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