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13_1_40cm_scaffold_5988_3

Organism: 13_1_40CM_Rokubacteria_69_96

partial RP 40 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38
Location: comp(3463..3867)

Top 3 Functional Annotations

Value Algorithm Source
rpfC; two-component system sensor-response regulator hybrid protein RpfC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 131.0
  • Bit_score: 151
  • Evalue 1.10e-33
two component sigma-54 specific Fis family transcriptional regulator id=14626363 bin=bin7_NC10_sister species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 130.0
  • Bit_score: 85
  • Evalue 4.00e-14

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGGGCAAGCCCATCCCGCTCGACCGCCTCGGCGAGGTCCTCTCCGTCATCGAGCCGCACGCGCTGAGCCGCCTCGAGGAGTCCTGGCGGCACGACGACCGACGCGCCTCGTCGCGGGCACACCTCTCCCTGCCGATCCACGTCCTCGAGTACGGCGGCGCCGAGCACCGCGGCACGACCGTGGAGCTCGGGGTGGAAGGCCTGAAGGCGCGTCTGGACGCGTCGCTCACGCCGCGCAGCGTGGTGAGGCTCTCGTTCACGCCGCCCGACGCGGGCTCCGCGATCACCGTCATGTCGCGGGTGATCCGCGCGGATCCCGATGGGCACGCGTTCGCCTTCGTCCACCTGCCCGAGGCCGACACCGAGCGCCTCCGCGACCTGATCCGGCGCCGCCCGTCCCGCTGA
PROTEIN sequence
Length: 135
MGKPIPLDRLGEVLSVIEPHALSRLEESWRHDDRRASSRAHLSLPIHVLEYGGAEHRGTTVELGVEGLKARLDASLTPRSVVRLSFTPPDAGSAITVMSRVIRADPDGHAFAFVHLPEADTERLRDLIRRRPSR*