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13_1_40cm_scaffold_6431_5

Organism: 13_1_40CM_Rokubacteria_69_96

partial RP 40 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38
Location: 2163..5384

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 999.99
  • Bit_score: 1658
  • Evalue 0.0
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 825.0
  • Bit_score: 810
  • Evalue 5.40e-232
Transcription-repair coupling factor id=4980429 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 999.99
  • Bit_score: 1638
  • Evalue 0.0

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 3222
ATGCTGAGGGACTGGTCGGCCTTTCACGTCCTGGCGAAGACCTTCGCCGAGGGACCCGTGTGCCTGCGCATCGCCGGGCTGACTGGAGCCGCCCGCGCCCTTGCCGTCGCCGAGCTCCTCCAGGCCCACCCGCGTCCCGCGCTGGTCCTCGTGGAGTCGATGACCGACGCCCATCACTGGACCCAGGACCTCAAATTCTTCGGCGCGCCCGCGCTCGAGTTTCCCGGGCGCGAGCCCCGGCTCTGGCGCGGCGGGCGTCAGCGGGAGGCGGACGCCGAGCGCGCCGTCATCTGCCGGCGGCTCGCCGCGGGCGAGCCCGTGGTGGTCGTCGTGACCCCCGAGGCGCTCGACGCCGAGATCGTCGCGCCAGGCGATTTCGCGTCGCGCACGCTGCGGCTCGCCAAGGGCGACTCCCTGGACCGCGAGCTCCTGCTCGAGGCGCTCGAGCGCGCCGGCTACGAGCGCGTCGACACCGTGGTCGAGGTCGGACAGTGGAGCCCCCGCGGCGGCATCGTCGATGTGTTCTCGCCGAGCCACGCGAGCCCCGCACGGGTCGAGTTCTTCGGCGACGAGATCGAGTCGATCAGGCTTTTCGACCCGACCTCCCAGCGGTCCAGCACGCCCCTCGACGAGCTCCTCGTCCTGCCCCTCGTGGCCCAGCGCGACGGCTCGGCCCCGGCGGGGCTCACCGACTACGTGCCGGCCGCGGCGCCGATCATCGTCGATGTCCCCCGCGTGCTCGACGCGACCCGCGAGGACGCGCCGGCGAGCCCGCCTCTCCGCGAGCGACTCGCCGGGCGCCAGCTGGTCGAGCTCTCGCTCGTGGCCGGCACGTCGAGCGCACAGGTGGGAGCCCTGCCGGAGGCCGTGGAGGTAACGCTCGAGACGCACGCGGTTCCTCTCTTCGGCGGCCGGTTCGCACAGCTCGCGGGCGAGATCGGGCGATGGCGCGCTGAGGGGTTCAGGATCCGCCTCGTCGCGTCCGACGAGCGGCAGGTCGAGCACCTGCGCCAGATTCTGCGCGAGCACGCGCTCGAGGCCCTCCCGGCGGCGACCCCCGACGGGGATGCGCCGCTCGCGATCGTCGTCGGAGACGTCTCCGCCGGGTTTTCGATCCCCGCGCTCGGCGTCATCGTCCTCACCGAGGCCGAGATCTTTGGCGCCCGCCGGCGCCTGCTGCGGCGGCCGAAGTACCAGCGCGGTGCCGAGCTCACGGCGTTCACCGATCTCGCGGTCGGTGACATCGTGGTCCACGAGGACCACGGGCTCGGGCGCTACCTCGGCCTCAAGACGATGACCGTCGGCGACCGCGAGGGCGACTTCCTCGTGCTCGAGTACGCGGAAGGCAACCAGCTCTACCTCCCCGTCGAGCGCCTGGATCTCGTCTCGAAATACCTGGGCGCCGACGCAGGCGCCGTCCGCCTCGACCGCCTGGGCGGCGTCTCGTGGCCACGCGTGAAGGAGTCGGTGCGCGCCGCCCTCCGGCAGATGGCCGAGGCGCTGCTCCGCCTCTACGCCCAGCGCGCGGTCGCGGACGGGCACGCCTGCTCGCCGGACACGTCCTGGCAGCGCGAGTTCGAGGCCGCTTTCCGCTTCGAGGAGACGCCCGACCAGCTGCGCGCGATCGAGGAGGTCAAGCGTGACCTGGAGGCGCGTCGTCCGATGGACCGGCTGGTTGCCGGCGACGTCGGGTACGGGAAGACCGAGGTGGCGCTCCGCGCCGCGTTCAAGGTGGTGGCCGACGGCATGCAGGCGGCGGTGCTCGTGCCCACGACGGTCCTGGCCCAGCAGCACTGGACGACGTTCGCCGACCGGTTTGCGGCCTTCCCGGCCCGTGTCGAGCTCCTGTCGCGGTTCCGGTCGCCCAAGGAGCAGAAGGCGGTCATCGAGGGCCTCCGGCAGGGAACGGTGGACGTGGTGATCGGCACCCACCGCCTGCTCTCGAAGGACGTCGCGTTCAAGCATCTGGGCCTCCTCGTCGTGGACGAAGAGCACCGGTTCGGCGTCGTCCACAAGGAGCGCATGAAGGAGCTCCGCGCGTCGGTGGACGTGCTCGCGCTGACCGCGACGCCCATTCCGCGGACGCTCTACATGTCGCTCGCGGGCGTCCGGGACATGTCGGTAATCGAGACTCCGCCGCTCGACCGGCTGCCTGTCGAGACGGTCATCCGACGGTTCAGCAAGGCGGTGATCAAGGAGGCGCTCACGCGCGAGCTCGAACGCGGCGGCCAGGTCTTCTTCGTCCACAACCGCGTGCAGTCGCTCCCCTCGGTGACGCGCTTCGTCCAGGAGCTGGTGCCGGAGGCGCGGGTGATCATGGCGCACGGCCAGATGAAGGAGCGCGAGCTCGAGGCCACCATGGTCAAGTTCGTGAGCGGCCAGGCCGACGTGCTCGTCGCGACCGCGATCGTCGAGTCGGGGCTCGACATCCCCGCGACGAACACGATCGTCGTGAACCGCGCCGACCGGTTCGGCCTGGCCCAGCTTTACCAGCTTCGGGGCCGCGTGGGGCGCGAGCGCCAGCAGGCGTACGCGTACCTGCTCGTGCCCGCGGACGGGCGGGTGGACGAGCAGGCGCAGCGTCGCCTCCGGGCGCTCCAGGAGTTCACGGAGCTGGGCTCGGGGTTCAAGCTCGCCCTGCGGGACCTCGAGATCCGCGGCGCGGGCAACCTCCTCGGGGCCGAGCAGCACGGCCACATCGCGGCCGTGGGCTTCGATCTTTACGCGAAGCTCCTGGGCGAGGCCGTGCGAGAATTGAGGGGCGAACCGGCCGCAGCGGCCGTCGAGCCTGTGATCAGCGTCGCGGCGGAGGGCTTCTTGCCGGACGCGTATGTCCCCGAGGTCAACCAGCGCCTCGCCTTCTACAAGCGGCTCGCCGGCGCGGTCAGTGACCCCGAGGTCGACGACCTGCGCGGAGAGCTCGTGGACCGGTTCGGCCCGCTCCCCGAGGAGGCCGAGCAGCTCCTCGACATCGTCCACTTGCGAGTGGCCGCGCGCCGGCTGGGCGTGGAGAAGCTAGAAGCGGGCGAGGGCATGGCGTTCGTCACGTTTGCGCCGGGGACACCCCTCGATCCCCGGCGGCTCGTCAGGGCGATTGAAGGGAGCCGGGGGCGGCTCAAGATGAAGCGTGAGTTCACGATCGAAGCGGTTGTGGAACGGGGGGAGTGGGCGCGGGTCCGCGGCTCCCTGCTGCGTCTCCTCGAGAGCCTCGACCGCTCATGA
PROTEIN sequence
Length: 1074
MLRDWSAFHVLAKTFAEGPVCLRIAGLTGAARALAVAELLQAHPRPALVLVESMTDAHHWTQDLKFFGAPALEFPGREPRLWRGGRQREADAERAVICRRLAAGEPVVVVVTPEALDAEIVAPGDFASRTLRLAKGDSLDRELLLEALERAGYERVDTVVEVGQWSPRGGIVDVFSPSHASPARVEFFGDEIESIRLFDPTSQRSSTPLDELLVLPLVAQRDGSAPAGLTDYVPAAAPIIVDVPRVLDATREDAPASPPLRERLAGRQLVELSLVAGTSSAQVGALPEAVEVTLETHAVPLFGGRFAQLAGEIGRWRAEGFRIRLVASDERQVEHLRQILREHALEALPAATPDGDAPLAIVVGDVSAGFSIPALGVIVLTEAEIFGARRRLLRRPKYQRGAELTAFTDLAVGDIVVHEDHGLGRYLGLKTMTVGDREGDFLVLEYAEGNQLYLPVERLDLVSKYLGADAGAVRLDRLGGVSWPRVKESVRAALRQMAEALLRLYAQRAVADGHACSPDTSWQREFEAAFRFEETPDQLRAIEEVKRDLEARRPMDRLVAGDVGYGKTEVALRAAFKVVADGMQAAVLVPTTVLAQQHWTTFADRFAAFPARVELLSRFRSPKEQKAVIEGLRQGTVDVVIGTHRLLSKDVAFKHLGLLVVDEEHRFGVVHKERMKELRASVDVLALTATPIPRTLYMSLAGVRDMSVIETPPLDRLPVETVIRRFSKAVIKEALTRELERGGQVFFVHNRVQSLPSVTRFVQELVPEARVIMAHGQMKERELEATMVKFVSGQADVLVATAIVESGLDIPATNTIVVNRADRFGLAQLYQLRGRVGRERQQAYAYLLVPADGRVDEQAQRRLRALQEFTELGSGFKLALRDLEIRGAGNLLGAEQHGHIAAVGFDLYAKLLGEAVRELRGEPAAAAVEPVISVAAEGFLPDAYVPEVNQRLAFYKRLAGAVSDPEVDDLRGELVDRFGPLPEEAEQLLDIVHLRVAARRLGVEKLEAGEGMAFVTFAPGTPLDPRRLVRAIEGSRGRLKMKREFTIEAVVERGEWARVRGSLLRLLESLDRS*