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13_1_40cm_scaffold_6431

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_6431_1
unknown

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3..287
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_scaffold_6431_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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290..1045
DNA (756bp) protein (252aa)
ATP synthase subunit A (EC:3.6.3.14) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
ATP synthase subunit A (EC:3.6.3.14) id=14625924 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ATP synthase subunit A (EC:3.6.3.14)
13_1_40cm_scaffold_6431_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1073..1405
DNA (333bp) protein (111aa)
ATP synthase subunit C, membrane-bound, F0 sector; DCCD-binding (EC:3.6.3.14) Tax=GWA2_Rokubacteria_70_23_curated
ATP synthase subunit C, membrane-bound, F0 sector DCCD-binding (Modular protein) id=4246292 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ATP synthase f0 subcomplex c subunit
13_1_40cm_scaffold_6431_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1512..2123
DNA (612bp) protein (204aa)
Redox-sensing transcriptional repressor rex id=4980428 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rex; redox-sensing transcriptional repressor rex Tax=GWA2_Rokubacteria_73_35_curated
rex; redox-sensing transcriptional repressor rex
13_1_40cm_scaffold_6431_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2163..5384
DNA (3222bp) protein (1074aa)
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-)
Transcription-repair coupling factor id=4980429 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_6431_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5381..6463
DNA (1083bp) protein (361aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PpiC-type peptidyl-prolyl cis-trans isomerase id=4980430 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_40cm_scaffold_6431_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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6601..7914
DNA (1314bp) protein (438aa)
rho; transcription termination factor Rho; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
rho; transcription termination factor Rho id=14625929 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
transcription termination factor Rho
13_1_40cm_scaffold_6431_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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7998..8210
DNA (213bp) protein (71aa)
LSU ribosomal protein L31P Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
50S ribosomal protein L31 id=14625930 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
LSU ribosomal protein L31P
13_1_40cm_scaffold_6431_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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8277..8696
DNA (420bp) protein (140aa)
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptide chain release factor 1 id=4980433 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
prfA; peptide chain release factor 1
Displaying 9 items

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