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13_1_40cm_scaffold_1836

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1836_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..450
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G7S6_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95900.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
13_1_40cm_scaffold_1836_2
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(437..2740)
DNA (2304bp) protein (768aa)
Spermine synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C301_SPHTD
spermine synthase
Spermine synthase {ECO:0000313|EMBL:ACZ38618.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sph
13_1_40cm_scaffold_1836_3
unknown

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3229..3534
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_scaffold_1836_4
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(3619..4242)
DNA (624bp) protein (208aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix
Phosphodiesterase, MJ0936 family n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D1J3_HALOH
phosphodiesterase
13_1_40cm_scaffold_1836_5
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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4330..5085
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EK04_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85016.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_40cm_scaffold_1836_6
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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5085..5465
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EK03_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85015.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_40cm_scaffold_1836_7
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5517..6788
DNA (1272bp) protein (424aa)
MFS transporter n=1 Tax=Streptomyces violaceoniger RepID=UPI0003C74DF4
putative drug resistance protein
Putative drug resistance protein {ECO:0000313|EMBL:BAJ31584.1}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strai
13_1_40cm_scaffold_1836_8
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

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comp(6795..8507)
DNA (1713bp) protein (571aa)
Predicted protein (Fragment) n=1 Tax=Hordeum vulgare var. distichum RepID=F2E5I5_HORVD
Predicted protein {ECO:0000313|EMBL:BAK02607.1}; Flags: Fragment;; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Po
hypothetical protein
13_1_40cm_scaffold_1836_9
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8582..9568)
DNA (987bp) protein (329aa)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC:1.2.4.4)
3-methyl-2-oxobutanoate dehydrogenase n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SIT9_9BACL
3-methyl-2-oxobutanoate dehydrogenase {ECO:0000313|EMBL:EHQ61043.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendriti
13_1_40cm_scaffold_1836_10
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9568..10944)
DNA (1377bp) protein (459aa)
Putative Isopropylmalate/citramalate/homocitrate synthase n=1 Tax=mine drainage metagenome RepID=E6Q4U0_9ZZZZ
2-isopropylmalate synthase {ECO:0000313|EMBL:KJR44661.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.
aksA; trans-homoaconitate synthase
13_1_40cm_scaffold_1836_11
Sulfurihydrogenibium azorense, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(10937..11479)
DNA (543bp) protein (181aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DWM7_SULAA
13_1_40cm_scaffold_1836_12
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11476..12771)
DNA (1296bp) protein (432aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate is
3-isopropylmalate dehydratase large subunit n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYK4_9FIRM
3-isopropylmalate dehydratase large subunit
13_1_40cm_scaffold_1836_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(12772..12984)
DNA (213bp) protein (71aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:CDM65964.1}; EC=1.1.1.85 {ECO:0000313|EMBL:CDM65964.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" so
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00037086E8
LeuB_2; isopropylmalate dehydrogenase
Displaying 13 items

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