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13_1_40cm_scaffold_1886

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1886_1
R_Nitrospinae_39_10, Nitrospinae, Bacteria

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comp(3..1145)
DNA (1143bp) protein (381aa)
adenylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1] Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
Putative adenylate cyclase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GG85_9DELT
GAF sensor-containing adenylate/guanylate cyclase
13_1_40cm_scaffold_1886_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1248..3470
DNA (2223bp) protein (741aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
UvrD/REP helicase n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BIE7_DEHSV
uvrD; UvrD/REP helicase
13_1_40cm_scaffold_1886_3
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

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3467..5449
DNA (1983bp) protein (661aa)
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=Caldatribacterium saccharofermentans
NAD-dependent DNA ligase (EC:6.5.1.2)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00036E1D10
13_1_40cm_scaffold_1886_4
unknown

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5458..5670
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_scaffold_1886_5
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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5717..5974
DNA (258bp) protein (86aa)
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000255|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000255|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=GATC_THERP
13_1_40cm_scaffold_1886_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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5971..7437
DNA (1467bp) protein (489aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=479434
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C542_SPHTD
glutamyl-tRNA(Gln) amidotransferase subunit A
13_1_40cm_scaffold_1886_7
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

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7857..8804
DNA (948bp) protein (316aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RBG_13_Chloroflexi_54_9_curated
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
aspartyl/glutamyl-tRNA amidotransferase subunit B n=1 Tax=Desulfurispora thermophila RepID=UPI0003737694
13_1_40cm_scaffold_1886_8
unknown

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comp(8905..9228)
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_scaffold_1886_9
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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9389..10117
DNA (729bp) protein (243aa)
Histidinol phosphate phosphatase HisJ family (EC:3.1.3.15)
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:CCG01153.1}; EC=3.1.3.15 {ECO:0000313|EMBL:CCG01153.1};; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatop
Histidinol phosphate phosphatase HisJ family n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKD0_BLASD
13_1_40cm_scaffold_1886_10
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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10105..11346
DNA (1242bp) protein (414aa)
RNA methyltransferase, TrmA family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8F3_SPHTD
RNA methyltransferase, TrmA family
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:ACZ40096.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobact
13_1_40cm_scaffold_1886_11
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(11590..12747)
DNA (1158bp) protein (386aa)
aspartate transaminase; K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RBG_13_Chloroflexi_56_8_curated
aspartate transaminase (EC:2.6.1.1)
Aspartate transaminase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK20_PSEUX
13_1_40cm_scaffold_1886_12
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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12996..16568
DNA (3573bp) protein (1191aa)
dnaE; DNA polymerase III DnaE (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotom
DNA polymerase III, alpha subunit n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D017_PELTS
13_1_40cm_scaffold_1886_13
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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16528..16773
DNA (246bp) protein (82aa)
transcription attenuation protein MtrB n=1 Tax=Bacillus massiliosenegalensis RepID=UPI00030CE4B2
transcription attenuation protein MtrB
Transcription attenuation protein MtrB {ECO:0000313|EMBL:AHV98092.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae
13_1_40cm_scaffold_1886_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(16770..17147)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PDZ6_9ACTO
rhodanese-like protein
Rhodanese-like protein {ECO:0000313|EMBL:AEA22814.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (str
13_1_40cm_scaffold_1886_trna_1
unknown

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17192..17264
DNA (73bp)
transferRNA
Displaying 15 items

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