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13_1_40cm_scaffold_292

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_292_1
GWA2_OD1_45_39_plus, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

2..607
DNA (606bp) protein (202aa)
Putative membrane-associated zinc metalloprotease n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B2M3_HERA2
Membrane-associated zinc metalloprotease Tax=GWA2_OD1_45_39_plus
membrane-associated zinc metalloprotease
13_1_40cm_scaffold_292_2
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

607..1743
DNA (1137bp) protein (379aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synt
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7R8_SPHTD
13_1_40cm_scaffold_292_3
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

1810..2367
DNA (558bp) protein (186aa)
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=GWC2_RIF_CHLX_73_18_curated
Suspect SCG annotation. See neighboring gene [13_1_40cm_scaffold_292_4].
Proline--tRNA ligase id=3811573 bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
prolyl-tRNA synthetase
13_1_40cm_scaffold_292_4
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists


2373..3218
DNA (846bp) protein (282aa)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] id=14632850 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=CSP1_3_Armatimonadetes
prolyl-tRNA synthetase, family I
13_1_40cm_scaffold_292_5
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(3332..6316)
DNA (2985bp) protein (995aa)
Metal dependent phosphohydrolase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B569_HERA2
metal dependent phosphohydrolase Tax=CG_Arma_02
metal dependent phosphohydrolase
13_1_40cm_scaffold_292_6
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

6405..8534
DNA (2130bp) protein (710aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=GWC2_RIF_CHLX_73_18_curated
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA id=3825037 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_scaffold_292_7
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

8531..9535
DNA (1005bp) protein (335aa)
putative N-acetyltransferase id=1245772 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative N-acetyltransferase Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
putative N-acetyltransferase
13_1_40cm_scaffold_292_8
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

9532..10158
DNA (627bp) protein (209aa)
Beta-lactamase domain-containing protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DVL4_DESRL
Zn-dependent hydrolase Tax=RBG_16_Chloroflexi_51_9_curated
beta-lactamase domain-containing protein
13_1_40cm_scaffold_292_9
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(10151..11080)
DNA (930bp) protein (310aa)
putative bacterial type II secretion system protein; K12511 tight adherence protein C Tax=RBG_16_Chloroflexi_63_12_curated
Type II secretion system protein id=4803559 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative bacterial type II secretion system protein
13_1_40cm_scaffold_292_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11077..12018)
DNA (942bp) protein (314aa)
Type II secretion system protein id=4803558 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
type II secretion system protein; K12510 tight adherence protein B Tax=GWC2_RIF_CHLX_73_18_curated
type II secretion system protein
13_1_40cm_scaffold_292_11
unknown

Not on your lists

comp(12022..12822)
DNA (801bp) protein (267aa)

This feature has no annotations

13_1_40cm_scaffold_292_12
unknown

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comp(12866..15190)
DNA (2325bp) protein (775aa)

This feature has no annotations

13_1_40cm_scaffold_292_13
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15190..15810)
DNA (621bp) protein (207aa)
TadE-like protein Tax=RBG_16_RIF_CHLX_72_14_curated
13_1_40cm_scaffold_292_14
Dietzia cinnamea, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15804..16340)
DNA (537bp) protein (179aa)
TadE family protein n=1 Tax=Dietzia cinnamea P4 RepID=E6JCZ4_9ACTO
TadE family protein {ECO:0000313|EMBL:EFV90495.1}; TaxID=910954 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia cinnamea P4.;"
13_1_40cm_scaffold_292_15
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(16333..17574)
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000366C2A6
response regulator receiver protein
Tax=BJP_08E140C01_Actinomycetales_67_18
13_1_40cm_scaffold_292_16
unknown

Not on your lists

17665..18501
DNA (837bp) protein (279aa)

This feature has no annotations

13_1_40cm_scaffold_292_17
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18498..19991
DNA (1494bp) protein (498aa)
Type II secretion system protein E n=2 Tax=Ruegeria RepID=C9CZL1_9RHOB
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:EEW58563.1}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibact
13_1_40cm_scaffold_292_18
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

19991..21601
DNA (1611bp) protein (537aa)
PAS fold family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VZF4_9CYAN
multi-sensor hybrid histidine kinase Tax=RBG_16_Chloroflexi_54_18_curated
multi-sensor hybrid histidine kinase
13_1_40cm_scaffold_292_19
unknown

Not on your lists

comp(21657..21989)
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_40cm_scaffold_292_20
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


22042..23298
DNA (1257bp) protein (419aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=24461266 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
13_1_40cm_scaffold_292_21
Bacillaceae bacterium MTCC 8252, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24157..24969
DNA (813bp) protein (271aa)
aspartyl-tRNA synthase n=1 Tax=Ureibacillus thermosphaericus RepID=UPI00030D2832
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KKB43451.1}; TaxID=1123719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; unclassified Bacillaceae.;" source="Bacillaceae bacterium MTCC 82
aspartyl-tRNA synthetase
13_1_40cm_scaffold_292_22
unknown

Not on your lists

25343..25639
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_scaffold_292_23
unknown

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25685..26020
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_scaffold_292_24
unknown

Not on your lists

26013..26342
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_40cm_scaffold_292_25
unknown

Not on your lists

26353..26778
DNA (426bp) protein (142aa)

This feature has no annotations

13_1_40cm_scaffold_292_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26804..27589
DNA (786bp) protein (262aa)
sigma-B/F/G subfamily RNA polymerase sigma-28 factor; K03090 RNA polymerase sigma-B factor id=24415222 bin=RBG_19FT_COMBO_GAL15_69_19 species=Atopobium sp. oral taxon 199 genus=Atopobium taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp.
RNA polymerase subunit sigma 28
13_1_40cm_scaffold_292_27
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

27590..28189
DNA (600bp) protein (200aa)
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxal 5'-phosphate synthase {ECO:0000256|SAAS:SAAS00025317}; EC=1.4.3.5 {ECO:0000256|SAAS:SAAS00025317};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaero
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7W4_SPHTD
13_1_40cm_scaffold_292_28
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists


28207..30774
DNA (2568bp) protein (856aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C426_SPHTD
13_1_40cm_scaffold_292_29
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

30771..32030
DNA (1260bp) protein (420aa)
Actin-like protein ATPase involved in cell division-like protein {ECO:0000313|EMBL:KKQ18046.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
Actin-like ATPase involved in cell division-like protein id=15189315 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
actin-like ATPase involved in cell division
13_1_40cm_scaffold_292_30
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Berkelbacteria, Bacteria

Not on your lists

32059..33651
DNA (1593bp) protein (531aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Berkelbacteria_50_28_curated
Displaying items 1-30 of 47 in total

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