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13_1_40cm_scaffold_4353

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4353_1
Paenibacillus sp. FSL R7-0273, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2..238
DNA (237bp) protein (79aa)
Glycosyl transferase family 8 {ECO:0000313|EMBL:AIQ46559.1}; TaxID=1536772 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0273.
13_1_40cm_scaffold_4353_2
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

210..1541
DNA (1332bp) protein (444aa)
hypothetical protein Tax=RBG_13_Chloroflexi_50_21_curated
Hypothetical membrane protein id=4317575 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
13_1_40cm_scaffold_4353_3
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1469..2734)
DNA (1266bp) protein (422aa)
Major facilitator superfamily MFS_1 n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JRF3_DESFR
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67931.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
multidrug-efflux transporter
13_1_40cm_scaffold_4353_4
unknown

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2778..3239
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_40cm_scaffold_4353_5
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3229..3429)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037FCA43
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABL81840.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / J
13_1_40cm_scaffold_4353_6
unknown

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comp(3609..4067)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_scaffold_4353_7
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

4129..4887
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EXZ7_9BACT
Short-chain alcohol dehydrogenase of unknown specificity
Uncharacterized protein {ECO:0000313|EMBL:CCW35188.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas cal
13_1_40cm_scaffold_4353_8
unknown

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comp(5550..5942)
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_scaffold_4353_9
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(5939..6643)
DNA (705bp) protein (235aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] Tax=RIF
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A193_9PLAN
13_1_40cm_scaffold_4353_10
Cyanobium gracile, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6657..7148)
DNA (492bp) protein (164aa)
UPF0234 protein Cyagr_1103 n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P6U0_CYAGP
hypothetical protein
UPF0234 protein Cyagr_1103 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=292564 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium gracile (strain ATCC 2
13_1_40cm_scaffold_4353_11
unknown

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comp(7141..7530)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_scaffold_4353_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7623..8588
DNA (966bp) protein (322aa)
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Putative branched-chain-amino-acid aminotransferase id=3811405 bin=GWC2_Chloroflexi_73_18 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
branched-chain amino acid aminotransferase
13_1_40cm_scaffold_4353_13
Ferrimonas balearica, Ferrimonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8869..9879
DNA (1011bp) protein (337aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase {ECO:0000313|EMBL:ADN75558.1}; EC=2.7.1.31 {ECO:0000313|EMBL:ADN75558.1};; TaxID=550540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Ferrimonadaceae; Ferri
Glycerate kinase n=1 Tax=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) RepID=E1SML9_FERBD
13_1_40cm_scaffold_4353_14
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

10100..10885
DNA (786bp) protein (262aa)
RNA polymerase sigma factor n=1 Tax=Bacillus macauensis ZFHKF-1 RepID=I8ANH0_9BACI
ECF subfamily RNA polymerase sigma-24 subunit Tax=RBG_13_Chloroflexi_66_10_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_scaffold_4353_15
unknown

Not on your lists

10908..11465
DNA (558bp) protein (186aa)

This feature has no annotations

13_1_40cm_scaffold_4353_16
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

12192..12407
DNA (216bp) protein (72aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000255|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000255|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000255|HAMAP-Rule:MF_01824};; Pdx1
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=PDXS_ROSCS
pyridoxal biosynthesis lyase PdxS
13_1_40cm_scaffold_4353_17
Propionibacterium humerusii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12454..13011
DNA (558bp) protein (186aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase g
glutamine amidotransferase n=1 Tax=Serinicoccus profundi RepID=UPI000255E708
glutamine amidotransferase subunit PdxT
13_1_40cm_scaffold_4353_18
unknown

Not on your lists

13008..13955
DNA (948bp) protein (316aa)

This feature has no annotations

13_1_40cm_scaffold_4353_19
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

13952..15508
DNA (1557bp) protein (519aa)
single-stranded nucleic acid binding R3H domain-containing protein id=14633013 bin=bin9_gal15 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
single-stranded nucleic acid binding R3H domain-containing protein Tax=CSP1_3_Armatimonadetes
single-stranded nucleic acid binding R3H
13_1_40cm_scaffold_4353_20
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

15623..16228
DNA (606bp) protein (202aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=504728 species="Bacteria; Deinococcus-Thermus;
Thymidylate kinase n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PME6_MEIRD
thymidylate kinase
13_1_40cm_scaffold_4353_21
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

16225..16554
DNA (330bp) protein (110aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
Putative uncharacterized protein id=3311649 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_scaffold_4353_22
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

16767..19151
DNA (2385bp) protein (795aa)
ABC transporter related n=2 Tax=Chloroflexus RepID=A9WB26_CHLAA
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABY34807.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus
13_1_40cm_scaffold_4353_23
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19249..19575)
DNA (327bp) protein (109aa)
Cation/cationic drug transporter n=1 Tax=Saccharomonospora glauca K62 RepID=I1D820_9PSEU
Cation/cationic drug transporter {ECO:0000313|EMBL:EIF01095.1}; Flags: Precursor;; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="S
qacE2; Quaternary ammonium compound resistance protein
13_1_40cm_scaffold_4353_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(19583..20074)
DNA (492bp) protein (164aa)
putative acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWA2_Rokubacteria_73_35_curated
Butyryl-CoA dehydrogenase id=4464474 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain-containing protein
Displaying 24 items

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