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13_1_40cm_scaffold_4404

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4404_1
R_NC10_66_22, NC10, Bacteria

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71..220
DNA (150bp) protein (50aa)
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 id=24458185 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Slackia taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ribosomal protein L33; K02913 large subunit ribosomal protein L33 Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
rpmG; 50S ribosomal protein L33
13_1_40cm_scaffold_4404_2
R_OP11_Levybacteria_41_15, Levybacteria, Microgenomates, Bacteria

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228..464
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Saccharomonospora saliphila RepID=UPI00036991DF
Preprotein translocase subunit SecE (TC 3.A.5.1.1); K03073 preprotein translocase subunit SecE Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_41_15_curated
13_1_40cm_scaffold_4404_3
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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464..1024
DNA (561bp) protein (187aa)
Transcription termination/antitermination protein NusG n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRZ9_ROSCS
NusG antitermination factor
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Rose
13_1_40cm_scaffold_4404_4
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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1052..1480
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL11_CARHZ
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_16_RIF_CHLX_69_14_curated
rplK; 50S ribosomal protein L11
13_1_40cm_scaffold_4404_5
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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1480..2211
DNA (732bp) protein (244aa)
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 id=14630125 bin=bin8_Chloro species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=CSP1_4_Chloroflexi
50S ribosomal protein L1
13_1_40cm_scaffold_4404_6
Thermobaculum terrenum, Thermobaculum, Bacteria

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2227..2769
DNA (543bp) protein (181aa)
GCN5-related N-acetyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDN6_THET1
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACZ41042.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_scaffold_4404_7
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

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2870..3427
DNA (558bp) protein (186aa)
50S ribosomal protein L10 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SLE0_THEM7
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RBG_13_Chloroflexi_46_14_curated
50S ribosomal protein L10
13_1_40cm_scaffold_4404_8
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3428..3826
DNA (399bp) protein (133aa)
50S ribosomal protein L7/L12 n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DPB3_DESRL
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum rumi
13_1_40cm_scaffold_4404_9
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3830..6229)
DNA (2400bp) protein (800aa)
Glycoside hydrolase family 65 central catalytic n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P4Q6_STRVO
glycoside hydrolase
Glycoside hydrolase family 65 central catalytic {ECO:0000313|EMBL:AEM83945.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
13_1_40cm_scaffold_4404_10
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6234..6923)
DNA (690bp) protein (230aa)
Putative hydrolase n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JVC8_STRHJ
Uncharacterized protein {ECO:0000313|EMBL:KIE39420.1}; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
putative hydrolase
13_1_40cm_scaffold_4404_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(7174..8340)
DNA (1167bp) protein (389aa)
Aminotransferase class V n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B7D5_HERA2
class V aminotransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
class V aminotransferase
13_1_40cm_scaffold_4404_12
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

8559..9284
DNA (726bp) protein (242aa)
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RBG_16_Acidobacteria_68_9_curated
DNA-directed RNA polymerase subunit beta n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=RPOB_HERA2
rpoB; DNA-directed RNA polymerase subunit beta
Displaying 12 items

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