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13_1_40cm_scaffold_7102

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_7102_1
unknown

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3..230
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_scaffold_7102_2
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(155..652)
DNA (498bp) protein (166aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HV86_9FIRM
ruvC; crossover junction endodeoxyribonuclease RuvC
13_1_40cm_scaffold_7102_3
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

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comp(679..1434)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000373DD5A
hypothetical protein Tax=Caldatribacterium californiense
hypothetical protein
13_1_40cm_scaffold_7102_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1468..2628)
DNA (1161bp) protein (387aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIW1_THEM7
13_1_40cm_scaffold_7102_5
unknown

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comp(2635..3189)
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_scaffold_7102_6
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(3243..5516)
DNA (2274bp) protein (758aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00283};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283};
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=SYFB_MOOTA
13_1_40cm_scaffold_7102_7
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6628..7398)
DNA (771bp) protein (257aa)
RNA methyltransferase n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B380D2
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
TrmH family RNA methyltransferase
13_1_40cm_scaffold_7102_8
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


comp(7477..7758)
DNA (282bp) protein (94aa)
50S ribosomal protein L20 n=7 Tax=Veillonella RepID=D6KIF3_9FIRM
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=RBG_16_RIF_CHLX_69_14_curated
50S ribosomal protein L20
13_1_40cm_scaffold_7102_9
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(7759..7953)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EAX5_9ACTN
LSU ribosomal protein L35P
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibact
13_1_40cm_scaffold_7102_10
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7946..8446)
DNA (501bp) protein (167aa)
Translation initiation factor IF-3 n=2 Tax=Desulfotomaculum RepID=F6B318_DESCC
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomac
13_1_40cm_scaffold_7102_11
unknown

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8790..9383
DNA (594bp) protein (198aa)

This feature has no annotations

13_1_40cm_scaffold_7102_12
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(9380..11143)
DNA (1764bp) protein (588aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDN7_THET1
threonyl-tRNA synthetase
13_1_40cm_scaffold_7102_13
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

11249..11848
DNA (600bp) protein (200aa)
Phosphoesterase, PA-phosphatase related n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZG8_RUBXD
PA-phosphatase-like phosphoesterase
Phosphoesterase, PA-phosphatase related {ECO:0000313|EMBL:ABG03210.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;
13_1_40cm_scaffold_7102_14
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(11796..12428)
DNA (633bp) protein (211aa)
Transporter, major facilitator family n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1V8_THERP
major facilitator family transporter
major facilitator superfamily protein Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
Displaying 14 items

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