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13_1_40cm_scaffold_867

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_867_1
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..197)
DNA (195bp) protein (65aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
13_1_40cm_scaffold_867_2
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(198..1019)
DNA (822bp) protein (274aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae;
Phosphatidate cytidylyltransferase n=1 Tax=Thermincola potens (strain JR) RepID=D5XEZ9_THEPJ
phosphatidate cytidylyltransferase
13_1_40cm_scaffold_867_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(1037..1717)
DNA (681bp) protein (227aa)
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RBG_16_Actinobacteria_68_12_curated
uppS; undecaprenyl diphosphate synthase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] id=7201057 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
uppS; undecaprenyl pyrophosphate synthase
13_1_40cm_scaffold_867_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(2482..3039)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4K4_SPHTD
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=479434 species="Bacteria;
13_1_40cm_scaffold_867_5
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(3047..3787)
DNA (741bp) protein (247aa)
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UK {ECO:0000255|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000255|HAMAP-Rule:MF_01220};; Uridine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF
Uridylate kinase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=PYRH_CARHZ
13_1_40cm_scaffold_867_6
Caldisericum exile, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

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comp(3817..4431)
DNA (615bp) protein (205aa)
Elongation factor Ts n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GJJ5_CALEA
tsf; elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=511051 species="Bacteria; Caldiserica; Caldisericia; Caldis
13_1_40cm_scaffold_867_7
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(4431..5276)
DNA (846bp) protein (282aa)
30S ribosomal protein S2 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RS2_HALOH
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000255|HAMAP-Rule:MF_00291}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii
13_1_40cm_scaffold_867_8
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(5408..7744)
DNA (2337bp) protein (779aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=383372 species="Bacteria; Chloroflex
DNA topoisomerase 1 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJW2_ROSCS
13_1_40cm_scaffold_867_9
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(7830..8675)
DNA (846bp) protein (282aa)
DNA protecting protein DprA n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UII5_ANASK
Uncharacterized protein {ECO:0000313|EMBL:KDA54931.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
DNA protecting protein DprA
13_1_40cm_scaffold_867_10
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(8662..10173)
DNA (1512bp) protein (504aa)
Mg chelatase, subunit ChlI n=2 Tax=Chloroflexus RepID=A9W9V8_CHLAA
Mg chelatase subunit ChlI
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:ABY34594.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chlorofle
13_1_40cm_scaffold_867_11

Not on your lists

comp(10256..11029)
DNA (774bp) protein (258aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO11138.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
beta-lactamase id=8266560 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
beta-lactamase-like protein
13_1_40cm_scaffold_867_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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11069..12034
DNA (966bp) protein (322aa)
ABC transporter related protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CD15_THET1
ABC transporter; K09687 antibiotic transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ABC transporter
13_1_40cm_scaffold_867_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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12031..13575
DNA (1545bp) protein (515aa)
Exporter of polyketide antibiotics n=2 Tax=Saccharopolyspora erythraea RepID=T2S1L0_SACER
exporter of polyketide antibiotics-like protein; K09686 antibiotic transport system permease protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
exporter of polyketide antibiotics-like protein
13_1_40cm_scaffold_867_14
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

13670..14494
DNA (825bp) protein (275aa)
Probable DNA repair protein DealDRAFT_1118 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GF59_9FIRM
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorell
Ku protein
13_1_40cm_scaffold_867_15
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

14520..15566
DNA (1047bp) protein (349aa)
DNA polymerase LigD, ligase domain protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H018_CELFA
DNA polymerase LigD, ligase domain-containing protein
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_40cm_scaffold_867_16
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

15574..16377
DNA (804bp) protein (268aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEJ4_GEOUR
NAD-dependent epimerase/dehydratase Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
NAD-dependent epimerase/dehydratase
Displaying 16 items

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