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13_1_40cm_scaffold_1364

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1364_1
unknown

Not on your lists

1..402
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_scaffold_1364_2
unknown

Not on your lists

383..739
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_scaffold_1364_3
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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763..1896
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DTV6_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EED06500.1}; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius
13_1_40cm_scaffold_1364_4
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

2175..2531
DNA (357bp) protein (119aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
13_1_40cm_scaffold_1364_5
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2559..2786
DNA (228bp) protein (76aa)
Putative transcriptional regulator n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PMY8_9BURK
Putative transcriptional regulator {ECO:0000313|EMBL:ELX12937.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="J
transcriptional regulator
13_1_40cm_scaffold_1364_6
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

2783..4015
DNA (1233bp) protein (411aa)
integrase n=1 Tax=Desulfobacter curvatus RepID=UPI00036975BD
phage integrase protein (DNA breaking and rejoining enzyme) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
integrase family protein
13_1_40cm_scaffold_1364_trna_1
unknown

Not on your lists

comp(4116..4189)
DNA (74bp)
transferRNA
13_1_40cm_scaffold_1364_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4239..5348)
DNA (1110bp) protein (370aa)
Glycosyl hydrolase, family 88 id=1270828 bin=GWE1_Burkholderiales_65_30 species=Cupriavidus pinatubonensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
glycosyl hydrolase family protein Tax=GWE1_Burkholderiales_65_30_curated
glycosyl hydrolase family protein
13_1_40cm_scaffold_1364_8
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

5520..6509
DNA (990bp) protein (330aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14625634 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_1364_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6512..8383
DNA (1872bp) protein (624aa)
Asparagine synthetase id=4814774 bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
asparagine synthase Tax=GWC2_Rokubacteria_70_16_curated
asparagine synthase
13_1_40cm_scaffold_1364_10
unknown

Not on your lists

8424..8846
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_40cm_scaffold_1364_11
unknown

Not on your lists

comp(8882..9142)
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_scaffold_1364_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9152..10660)
DNA (1509bp) protein (503aa)
Glycosyl transferase, group 2 family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glycosyl transferase, group 2 family protein id=3975791 bin=GWA2_Methylomirabilis_73_35 species=Labrenzia alexandrii genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1364_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10678..10956)
DNA (279bp) protein (93aa)
Septum formation initiator family protein id=3975793 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
septum formation initiator; K13052 cell division protein DivIC Tax=GWA2_Rokubacteria_73_35_curated
septum formation initiator
13_1_40cm_scaffold_1364_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10953..12242)
DNA (1290bp) protein (430aa)
phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
enolase (EC:4.2.1.11)
Enolase id=3975795 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1364_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12243..13139)
DNA (897bp) protein (299aa)
polyprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Polyprenyl synthetase id=3975797 bin=GWA2_Methylomirabilis_73_35 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
trans-isoprenyl diphosphate synthase
13_1_40cm_scaffold_1364_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13136..13378)
DNA (243bp) protein (81aa)
exodeoxyribonuclease VII, small subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Exodeoxyribonuclease 7 small subunit id=3975799 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
exodeoxyribonuclease VII small subunit
13_1_40cm_scaffold_1364_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13359..14648)
DNA (1290bp) protein (430aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=GWA2_Rokubacteria_73_35_curated
exodeoxyribonuclease VII large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] id=14627995 bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
exodeoxyribonuclease VII large subunit
13_1_40cm_scaffold_1364_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15612..16388)
DNA (777bp) protein (259aa)
metallophosphoesterase; K09769 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Metallophosphoesterase id=3975805 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphoesterase
13_1_40cm_scaffold_1364_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(16395..17951)
DNA (1557bp) protein (519aa)
ymdA; 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC:3.1.4.16); K06950 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Ribonuclease Y id=4039892 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_scaffold_1364_20
R_RIF_OD1_09_50_20, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(18574..19656)
DNA (1083bp) protein (361aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_50_20_curated
Putative uncharacterized protein id=2836931 bin=GWF2_CPR3_35_18 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWF2_CPR3_35_18 organism_group=CPR3
hypothetical protein
13_1_40cm_scaffold_1364_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19734..20966)
DNA (1233bp) protein (411aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Export ABC transporter permease id=2720746 bin=GWA2_Methylomirabilis_73_35 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
export ABC transporter permease
13_1_40cm_scaffold_1364_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(20963..21586)
DNA (624bp) protein (208aa)
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative transporter subunit: ATP-binding component of ABC superfamily id=2720745 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ybbA; transporter subunit: ATP-binding component of ABC superfamily
13_1_40cm_scaffold_1364_23
RBG_16_Aminicenantes_63_16_plus, RBG_16_Aminicenantes_63_16_plus, RBG_16_Aminicenantes_63_16_plus, RBG_16_Aminicenantes_63_16_plus, Aminicenantes, Bacteria

Not on your lists

22257..23354
DNA (1098bp) protein (366aa)
id=16828964 bin=RBG_16_Aminicenantes_63_16_plus tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
id=16828964 bin=RBG_16_Aminicenantes_63_16_plus tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
Displaying 24 items

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