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13_1_40cm_scaffold_1490

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1490_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1..159
DNA (159bp) protein (53aa)
YCII-related id=3914668 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
YciI-like protein; K09780 hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_scaffold_1490_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(210..665)
DNA (456bp) protein (152aa)
Putative uncharacterized protein id=4677000 bin=GWF2_Methylomirabilis_70_14 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative uncharacterized protein Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_1490_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(853..2019)
DNA (1167bp) protein (389aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=3960244 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1490_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2127..3512
DNA (1386bp) protein (462aa)
pyridoxal-phosphate dependent TrpB-like enzyme; K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Tryptophan synthase beta chain id=3960243 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxal-phosphate dependent TrpB-like enzyme
13_1_40cm_scaffold_1490_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3522..4523
DNA (1002bp) protein (334aa)
quaternary amine uptake ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein id=14627586 bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
quaternary amine uptake ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
quaternary amine uptake ABC transporter substrate-binding protein
13_1_40cm_scaffold_1490_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4520..5278
DNA (759bp) protein (253aa)
ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit id=3960241 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nitrate/sulfonate/bicarbonate ABC transporter permease; K02050 NitT/TauT family transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
nitrate/sulfonate/bicarbonate ABC transporter permease
13_1_40cm_scaffold_1490_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5269..6018
DNA (750bp) protein (250aa)
ABC transporter, ATP-binding protein id=3960160 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter ATP-binding protein
13_1_40cm_scaffold_1490_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6112..6525)
DNA (414bp) protein (138aa)
id=14627740 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_40cm_scaffold_1490_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6527..6730)
DNA (204bp) protein (68aa)
id=14627741 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_40cm_scaffold_1490_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6943..8658
DNA (1716bp) protein (572aa)
cyaCe; adenylate cyclase (EC:4.6.1.1)
Adenylate/guanylate cyclase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DTG4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ETW92716.1}; Flags: Fragment;; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
13_1_40cm_scaffold_1490_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8655..9722
DNA (1068bp) protein (356aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Hydrolase, carbon-nitrogen family id=3960157 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Providencia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase
13_1_40cm_scaffold_1490_12
unknown

Not on your lists

comp(9846..9989)
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_scaffold_1490_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(10166..11041)
DNA (876bp) protein (292aa)
putative glycosyl transferase, family 9 (EC:2.4.-.-) Tax=GWA2_Rokubacteria_73_35_curated
Putative Glycosyl transferase, family 9 id=3960148 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase family protein
13_1_40cm_scaffold_1490_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11083..11841)
DNA (759bp) protein (253aa)
histidinol-phosphate phosphatase; K05602 histidinol-phosphatase [EC:3.1.3.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
histidinol-phosphate phosphatase, putative id=3960146 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidinol-phosphate phosphatase
13_1_40cm_scaffold_1490_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11841..12245)
DNA (405bp) protein (135aa)
Predicted 4-carboxymuconolactone decarboxylase id=3960144 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein
13_1_40cm_scaffold_1490_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12242..12688)
DNA (447bp) protein (149aa)
esterase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Esterase EstC, putative id=3960142 bin=GWA2_Methylomirabilis_73_35 species=Pelagibaca bermudensis genus=Pelagibaca taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1490_17
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12707..13318)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BTC6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ETX06013.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_40cm_scaffold_1490_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13370..14740
DNA (1371bp) protein (457aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] id=14626970 bin=bin7_NC10_sister species=Thermodesulfobacterium geofontis genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin7_NC10_sister organism_group=NC10
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
13_1_40cm_scaffold_1490_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14945..15673)
DNA (729bp) protein (243aa)
Putative Haloacid dehalogenase-like hydrolase domain-containing protein 3 id=3960137 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Haloacid dehalogenase-like hydrolase domain-containing protein 3 Tax=GWA2_Rokubacteria_73_35_curated
Haloacid dehalogenase-like hydrolase domain-containing protein 3
13_1_40cm_scaffold_1490_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15778..16149
DNA (372bp) protein (124aa)
Copper resistance protein CopC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Copper resistance protein CopC id=14626965 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
uncharacterized protein
13_1_40cm_scaffold_1490_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16157..18142
DNA (1986bp) protein (662aa)
copper resistance D domain-containing protein; K07245 putative copper resistance protein D Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cytochrome c, class I id=4166552 bin=GWA2_Methylomirabilis_73_35 species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
copper resistance D domain-containing protein
13_1_40cm_scaffold_1490_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18142..18507
DNA (366bp) protein (122aa)
Electron transport protein SCO1/SenC id=4166553 bin=GWA2_Methylomirabilis_73_35 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Electron transport protein SCO1/SenC Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_1490_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18521..19285
DNA (765bp) protein (255aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3202771 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Displaying 23 items

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