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13_1_40cm_scaffold_1570

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1570_1
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

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2..1936
DNA (1935bp) protein (645aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKT7_SYNFM
hypothetical protein Tax=RBG_16_RIF03_38_10_curated
hypothetical protein
13_1_40cm_scaffold_1570_2
unknown

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1945..2268
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_scaffold_1570_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2295..3167)
DNA (873bp) protein (291aa)
Uncharacterized conserved protein id=3830375 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_1570_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3244..4245
DNA (1002bp) protein (334aa)
aminocarboxymuconate-semialdehyde decarboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative TIM-barrel fold metal-dependent hydrolase id=3830378 bin=GWA2_Methylomirabilis_73_35 species=Pseudomonas sp. GM67 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aminocarboxymuconate-semialdehyde decarboxylase
13_1_40cm_scaffold_1570_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4242..5102
DNA (861bp) protein (287aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family id=3033647 bin=GWC2_Methylomirabilis_70_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=GWC2_Rokubacteria_70_16_curated
amino acid/amide ABC transporter membrane protein 1, HAAT family
13_1_40cm_scaffold_1570_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5329..6252
DNA (924bp) protein (308aa)
ABC-type transporter, integral membrane subunit id=2654099 bin=GWC2_Methylomirabilis_70_24 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid ABC transporter Tax=GWA2_Rokubacteria_70_23_curated
amino acid ABC transporter
13_1_40cm_scaffold_1570_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6269..7522
DNA (1254bp) protein (418aa)
Extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Extracellular ligand-binding receptor id=4827657 bin=GWA2_Methylomirabilis_73_35 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Extracellular ligand-binding receptor
13_1_40cm_scaffold_1570_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7641..8384
DNA (744bp) protein (248aa)
ABC transporter permease; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter permease protein id=3033655 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease
13_1_40cm_scaffold_1570_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8377..9069
DNA (693bp) protein (231aa)
ABC transporter related id=4827655 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein Tax=GWA2_Rokubacteria_73_35_curated
branched-chain amino acid ABC transporter ATPase
13_1_40cm_scaffold_1570_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9080..10171
DNA (1092bp) protein (364aa)
luciferase-like monooxygenase n=1 Tax=Bacillus sp. 10403023 RepID=UPI000288D90A
luciferase-like monooxygenase Tax=GWA2_Rokubacteria_73_35_curated
luciferase-like monooxygenase
13_1_40cm_scaffold_1570_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10373..11047
DNA (675bp) protein (225aa)
integron integrase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative integron integrase (Fragment) id=4119987 bin=GWF2_Methylomirabilis_70_14 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1570_12
unknown

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11148..11825
DNA (678bp) protein (226aa)

This feature has no annotations

13_1_40cm_scaffold_1570_13
unknown

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comp(11999..12091)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 13 items

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