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13_1_40cm_scaffold_1700

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1700_1
unknown

Not on your lists

comp(2..127)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_scaffold_1700_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(340..822)
DNA (483bp) protein (161aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Glyoxalase/bleomycin resistance protein/dioxygenase id=4468113 bin=GWC2_Methylomirabilis_70_16 species=Acanthamoeba castellanii genus=Acanthamoeba taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_1700_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1089..1922)
DNA (834bp) protein (278aa)
PREDICTED: formamidopyrimidine-DNA glycosylase-like n=1 Tax=Amphimedon queenslandica RepID=UPI00021A600D
Uncharacterized protein {ECO:0000313|EMBL:ETX00967.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Formamidopyrimidine-DNA glycosylase
13_1_40cm_scaffold_1700_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1958..3034
DNA (1077bp) protein (359aa)
mandelate racemase / L-alanine-DL-glutamate epimerase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Mandelate racemase/muconate lactonizing enzyme-like protein id=4539025 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mandelate racemase / L-alanine-DL-glutamate epimerase
13_1_40cm_scaffold_1700_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3036..3713)
DNA (678bp) protein (226aa)
peptidylprolyl isomerase (EC:5.2.1.8) Tax=GWA2_Rokubacteria_70_23_curated
peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ09_9BACT
13_1_40cm_scaffold_1700_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3780..4316
DNA (537bp) protein (179aa)
Sulfopyruvate decarboxylase - alpha subunit (EC:4.1.1.79)
thiamine pyrophosphate enzyme, N-terminal TPP-binding domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain-containing protein id=4468117 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus sp. HMR-1 genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1700_7
unknown

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comp(4519..4662)
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_scaffold_1700_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5004..6050
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000361F0ED
Uncharacterized protein {ECO:0000313|EMBL:ETW99261.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
luciferase-like monooxygenase
13_1_40cm_scaffold_1700_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6031..7524)
DNA (1494bp) protein (498aa)
Amidohydrolase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LJ35_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ETW94500.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
amidohydrolase
13_1_40cm_scaffold_1700_10
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7521..9038)
DNA (1518bp) protein (506aa)
Putative ABC transporter (ATP-binding protein) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T4Q5_9BRAD
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWY37376.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Ske
putative ABC transporter
13_1_40cm_scaffold_1700_11
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9035..9964)
DNA (930bp) protein (310aa)
ABC transporter permease protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TJU4_TISMK
ABC transporter permease {ECO:0000313|EMBL:KJB93928.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella ae
ABC transporter permease
13_1_40cm_scaffold_1700_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9966..11009)
DNA (1044bp) protein (348aa)
Putative simple sugar transport system permease protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TJU5_TISMK
ABC transporter permease {ECO:0000313|EMBL:KJB93929.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella ae
putative ABC transporter (permease protein)
13_1_40cm_scaffold_1700_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11013..12146)
DNA (1134bp) protein (378aa)
ABC transporter substrate-binding protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000372041E
Uncharacterized protein {ECO:0000313|EMBL:EZO89542.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
ABC transporter substrate-binding protein
13_1_40cm_scaffold_1700_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12210..12728
DNA (519bp) protein (173aa)
conserved protein of unknown function; putative thioesterase domain Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=4829157 bin=GWC2_Methylomirabilis_70_16 species=Thalassospira profundimaris genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_1700_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

12725..14008
DNA (1284bp) protein (428aa)
yqjV-like MFS-type transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Uncharacterized protein id=1735155 bin=GWD2_Deltaproteobacteria_55_8 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
yqjV-like MFS-type transporter
13_1_40cm_scaffold_1700_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14072..15739
DNA (1668bp) protein (556aa)
Phosphogluconate dehydrogenase, NAD-binding id=4829159 bin=GWC2_Methylomirabilis_70_16 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative NAD(P)-binding protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_scaffold_1700_17
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

15751..16245
DNA (495bp) protein (165aa)
nitroreductase id=24475226 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
nitroreductase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
nitroreductase-like protein
13_1_40cm_scaffold_1700_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16379..18415
DNA (2037bp) protein (679aa)
oligopeptidase B (EC:3.4.21.83); K01354 oligopeptidase B [EC:3.4.21.83] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
oligopeptidase B (EC:3.4.21.83)
Uncharacterized protein n=1 Tax=uncultured Latescibacteria bacterium RepID=Q2YZV3_9BACT
13_1_40cm_scaffold_1700_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

18412..19377
DNA (966bp) protein (322aa)
hypothetical protein id=14626958 bin=bin7_NC10_sister species=Metallosphaera cuprina genus=Metallosphaera taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_1700_20
unknown

Not on your lists

comp(19329..20630)
DNA (1302bp) protein (434aa)

This feature has no annotations

13_1_40cm_scaffold_1700_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20802..21479
DNA (678bp) protein (226aa)
carboxylesterase (EC:3.1.1.1); K06999 phospholipase/carboxylesterase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Carboxylesterase id=3732186 bin=GWA2_Methylomirabilis_73_35 species=Alcaligenes faecalis genus=Alcaligenes taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
carboxylesterase
13_1_40cm_scaffold_1700_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21488..23803)
DNA (2316bp) protein (772aa)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UW21_ROSS1
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
13_1_40cm_scaffold_1700_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

24347..24994
DNA (648bp) protein (216aa)
msrA; methionine-s-sulfoxide reductase; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Peptide methionine sulfoxide reductase msrA (EC:1.8.4.11)
methionine sulfoxide reductase A n=1 Tax=Chlorogloeopsis RepID=UPI0002E321B6
13_1_40cm_scaffold_1700_24
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(25220..25849)
DNA (630bp) protein (210aa)
hypothetical protein id=14626974 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_1700_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(25873..27090)
DNA (1218bp) protein (406aa)
Major facilitator superfamily MFS_1 id=4183754 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily MFS_1 Tax=GWA2_Rokubacteria_73_35_curated
major facilitator superfamily MFS_1
13_1_40cm_scaffold_1700_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(27103..27549)
DNA (447bp) protein (149aa)
Uncharacterized protein id=4183757 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_1700_27
Leptospira inadai, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

27702..28184
DNA (483bp) protein (161aa)
PF03928 domain protein n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0FEY4_9LEPT
PF03928 domain protein {ECO:0000313|EMBL:EQA35362.1}; TaxID=1049790 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira inadai serovar Lyme str. 10.;"
hypothetical protein
13_1_40cm_scaffold_1700_28
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28318..28650
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCX5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63189.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
Displaying 28 items

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