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13_1_40cm_scaffold_2145

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2145_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(188..1366)
DNA (1179bp) protein (393aa)
TIGR00299 family protein Tax=GWA2_Rokubacteria_73_35_curated
TIGR00299 family protein id=14625901 bin=bin7_NC10_sister species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
TIGR00299 family protein
13_1_40cm_scaffold_2145_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1516..2271)
DNA (756bp) protein (252aa)
NCAIR mutase-like protein; K06898 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase id=4947257 bin=GWA2_Methylomirabilis_73_35 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate carboxylase
13_1_40cm_scaffold_2145_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2264..3178)
DNA (915bp) protein (305aa)
ExsB family protein; K06864 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PP-loop domain-containing protein; K06864 uncharacterized protein id=14625899 bin=bin7_NC10_sister species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
PP-loop domain-containing protein
13_1_40cm_scaffold_2145_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3186..4097)
DNA (912bp) protein (304aa)
PfkB id=4947255 bin=GWA2_Methylomirabilis_73_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
carbohydrate kinase Tax=GWA2_Rokubacteria_73_35_curated
sugar kinase
13_1_40cm_scaffold_2145_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(4090..5007)
DNA (918bp) protein (306aa)
putative s-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative s-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] id=14625897 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
putative s-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28)
13_1_40cm_scaffold_2145_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5004..6344)
DNA (1341bp) protein (447aa)
tRNA (2-methylthio-N6-threonylcarbamyl-A37) methylthiotransferase id=4947253 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MiaB-like tRNA modifying enzyme Tax=GWA2_Rokubacteria_73_35_curated
MiaB family RNA modification protein
13_1_40cm_scaffold_2145_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6341..7384)
DNA (1044bp) protein (348aa)
pyruvate formate lyase activating enzyme 2 (yfgB) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Probable dual-specificity RNA methyltransferase RlmN id=3130417 bin=GWC2_Methylomirabilis_70_24 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
radical SAM enzyme, Cfr family
13_1_40cm_scaffold_2145_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7493..8827)
DNA (1335bp) protein (445aa)
glycerate 2-kinase (EC:2.7.1.-); K00050 hydroxypyruvate reductase [EC:1.1.1.81] Tax=GWA2_Rokubacteria_73_35_curated
glycerate 2-kinase (EC:2.7.1.-)
Glycerate 2-kinase id=4947252 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 8 items

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