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13_1_40cm_scaffold_2359

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2359_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2..301
DNA (300bp) protein (100aa)
ifoA_iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Indolepyruvate ferredoxin oxidoreductase, alpha subunit id=1906308 bin=GWA2_Methylomirabilis_73_35 species=Bordetella holmesii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
indolepyruvate ferredoxin oxidoreductase
13_1_40cm_scaffold_2359_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

298..1830
DNA (1533bp) protein (511aa)
pyruvate/ketoisovalerate oxidoreductase; K00180 indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] id=14426171 bin=bin1_lowGC species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
ifoB_iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
pyruvate/ketoisovalerate oxidoreductase
13_1_40cm_scaffold_2359_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1811..2014)
DNA (204bp) protein (68aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=2507307 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
13_1_40cm_scaffold_2359_4
unknown

Not on your lists

comp(2022..2228)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_scaffold_2359_5
unknown

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2580..3233
DNA (654bp) protein (218aa)

This feature has no annotations

13_1_40cm_scaffold_2359_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3065..3643)
DNA (579bp) protein (193aa)
id=2696010 Tax=GWC2_Rokubacteria_70_16_curated
id=2696010 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_2359_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

3722..4075
DNA (354bp) protein (118aa)
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
nuoA; NADH-quinone oxidoreductase, subunit A id=14626933 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
13_1_40cm_scaffold_2359_8
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

4066..4704
DNA (639bp) protein (213aa)
nuoB; NADH dehydrogenase I subunit B; K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
NAD; NADH-ubiquinone oxidoreductase 20 kDa subunit (NADH dehydrogenase subunit 10) (EC:1.6.5.3) id=14626932 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
nuoB; NADH dehydrogenase I subunit B
13_1_40cm_scaffold_2359_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

4712..5164
DNA (453bp) protein (151aa)
NADH (or F420H2) dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
NADH (or F420H2) dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] id=14626931 bin=bin7_NC10_sister species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.99.5)
13_1_40cm_scaffold_2359_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5180..5815
DNA (636bp) protein (212aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=3051785 bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_2359_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5915..7075
DNA (1161bp) protein (387aa)
NADH dehydrogenase I, D subunit (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
NAD(P)H-quinone oxidoreductase subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D id=3051782 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_2359_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

7072..8049
DNA (978bp) protein (326aa)
respiratory-chain NADH dehydrogenase subunit 1; K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
NADH-quinone oxidoreductase subunit H id=4149417 bin=GWC2_Methylomirabilis_70_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
respiratory-chain NADH dehydrogenase subunit 1
13_1_40cm_scaffold_2359_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8081..8611
DNA (531bp) protein (177aa)
NADH-quinone oxidoreductase subunit i (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
nuoI; NADH-quinone oxidoreductase subunit I (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] id=14626927 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
NADH-quinone oxidoreductase subunit i (EC:1.6.99.5)
13_1_40cm_scaffold_2359_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8608..9096
DNA (489bp) protein (163aa)
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
NAD(P)H-quinone oxidoreductase chain 6 (NAD(P)H dehydrogenase I, chain 6) (NDH-1, chain 6) id=3051773 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
proton-translocating NADH-quinone oxidoreductase subunit J
13_1_40cm_scaffold_2359_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

9096..9404
DNA (309bp) protein (103aa)
NADH-ubiquinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
NADH-quinone oxidoreductase subunit K id=3738931 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADH-ubiquinone oxidoreductase subunit 4L
13_1_40cm_scaffold_2359_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

9409..11235
DNA (1827bp) protein (609aa)
proton-translocating NADH-quinone oxidoreductase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
proton-translocating NADH-quinone oxidoreductase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] id=14626924 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
proton-translocating NADH-quinone oxidoreductase subunit L
13_1_40cm_scaffold_2359_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

11232..12761
DNA (1530bp) protein (510aa)
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] id=14626923 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5)
13_1_40cm_scaffold_2359_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12758..14167
DNA (1410bp) protein (470aa)
proton-translocating NADH-quinone oxidoreductase, chain N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
proton-translocating NADH-quinone oxidoreductase, chain N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] id=14626922 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
proton-translocating NADH-quinone oxidoreductase, chain N (EC:1.6.99.5)
13_1_40cm_scaffold_2359_19
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14214..14708
DNA (495bp) protein (165aa)
dienelactone hydrolase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
dienelactone hydrolase (EC:3.1.1.45)
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0003664FAD
Displaying 19 items

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