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13_1_40cm_scaffold_2369

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2369_1
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..156
DNA (156bp) protein (52aa)
transcriptional regulator domain-containing protein Tax=RBG_16_Gamma2_64_10_curated
13_1_40cm_scaffold_2369_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(816..2030)
DNA (1215bp) protein (405aa)
transporter n=1 Tax=Serratia marcescens RepID=UPI000308EA14
major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
major facilitator superfamily transporter
13_1_40cm_scaffold_2369_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2042..2461)
DNA (420bp) protein (140aa)
glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase [EC:4.4.1.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JG8_MESSB
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_scaffold_2369_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2474..2623)
DNA (150bp) protein (50aa)
alcohol dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
Alcohol dehydrogenase, zinc-binding domain protein id=2319311 bin=GWA2_Methylomirabilis_73_35 species=Calothrix sp. PCC 7507 genus=Calothrix taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase
13_1_40cm_scaffold_2369_5
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2657..3490)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035EF1FE
putative carboxyvinyl-carboxyphosphonate phosphorylmutase Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
hypothetical protein
13_1_40cm_scaffold_2369_6
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3499..4014)
DNA (516bp) protein (172aa)
TPR repeat n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BT9_POLSJ
hypothetical protein Tax=RBG_16_Betaproteobacteria_66_20_curated
hypothetical protein
13_1_40cm_scaffold_2369_7
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4031..5590)
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002F40025
Uncharacterized protein {ECO:0000313|EMBL:EHP41604.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basile
conserved protein of unknown function, TPR repeat domain
13_1_40cm_scaffold_2369_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5889..6434)
DNA (546bp) protein (182aa)
hypothetical protein; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Putative uncharacterized protein id=4935489 bin=GWC2_Methylomirabilis_70_24 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
pcaC; hypothetical protein
13_1_40cm_scaffold_2369_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6750..8021)
DNA (1272bp) protein (424aa)
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA Tax=GWA2_Rokubacteria_70_23_curated
CinA-like protein id=4532703 bin=GWF2_Methylomirabilis_70_14 species=Shewanella sediminis genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
competence/damage-inducible protein CinA
13_1_40cm_scaffold_2369_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8281..9432
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003718233
Uncharacterized protein {ECO:0000313|EMBL:ETX03064.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
acyl-CoA dehydrogenase
13_1_40cm_scaffold_2369_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9552..10640)
DNA (1089bp) protein (363aa)
mdh2; malate dehydrogenase (EC:1.1.1.37) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
malate/L-lactate dehydrogenase (EC:1.1.1.-)
Malate/L-lactate dehydrogenase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FEA8_9BURK
13_1_40cm_scaffold_2369_12
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10637..11167)
DNA (531bp) protein (177aa)
Glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase n=2 Tax=Cupriavidus RepID=L2EJ51_9BURK
SCIF3.06c; oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase
13_1_40cm_scaffold_2369_13
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11228..11407)
DNA (180bp) protein (60aa)
Hydrolase {ECO:0000313|EMBL:KKA37612.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
13_1_40cm_scaffold_2369_14
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11415..12629)
DNA (1215bp) protein (405aa)
6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase {ECO:0000313|EMBL:AIF52548.1}; EC=3.1.1.31 {ECO:0000313|EMBL:AIF52548.1};; Flags: Precursor;; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veil
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI000379C4C1
13_1_40cm_scaffold_2369_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12727..14043)
DNA (1317bp) protein (439aa)
TRAP transporter, DctM subunit 7 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HI07_ACHXA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
TRAP transporter subunit DctM
13_1_40cm_scaffold_2369_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14040..14549)
DNA (510bp) protein (170aa)
Tripartite AtP-independent periplasmic transporter subunit DctQ n=1 Tax=Oceanibaculum indicum P24 RepID=K2KHR3_9PROT
tripartite ATP-independent periplasmic transporter DctQ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
tripartite AtP-independent periplasmic transporter subunit DctQ
13_1_40cm_scaffold_2369_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14546..15556)
DNA (1011bp) protein (337aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6C271_DESAD
TRAP dicarboxylate transporter-DctP subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
TRAP dicarboxylate transporter-DctP subunit
13_1_40cm_scaffold_2369_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15591..16799)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003629DA3
Uncharacterized protein {ECO:0000313|EMBL:ETX01280.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
amidohydrolase
13_1_40cm_scaffold_2369_19
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(17019..17729)
DNA (711bp) protein (237aa)
hydrophobic amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) id=1906303 bin=GWA2_Methylomirabilis_73_35 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hydrophobic amino acid ABC transporter ATP-binding protein
13_1_40cm_scaffold_2369_20
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(17733..18470)
DNA (738bp) protein (246aa)
ABC transporter related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBK2_9CHLR
branched-chain amino acid transport ATP-binding protein LivG; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
branched-chain amino acid transport ATP-binding protein LivG
13_1_40cm_scaffold_2369_21
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(18473..19387)
DNA (915bp) protein (305aa)
ABC transporter permease protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89VI9_BRADU
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC transporter permease
13_1_40cm_scaffold_2369_22
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(19384..20262)
DNA (879bp) protein (293aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Polaromonas sp. CF318 RepID=J2KPZ7_9BURK
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
branched-chain amino acid ABC transporter permease protein
13_1_40cm_scaffold_2369_23
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(20399..21571)
DNA (1173bp) protein (391aa)
Amino acid ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJ94_AGRRK
braC2; amino acid ABC transporter; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
braC2; amino acid ABC transporter
13_1_40cm_scaffold_2369_24
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21571..22803)
DNA (1233bp) protein (411aa)
LVIVD repeat protein n=1 Tax=Burkholderia sp. H160 RepID=B5WB25_9BURK
LVIVD repeat protein {ECO:0000313|EMBL:EEA04373.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160
hypothetical protein
13_1_40cm_scaffold_2369_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22824..23849)
DNA (1026bp) protein (342aa)
Luciferase-like monooxygenase n=1 Tax=Variovorax paradoxus B4 RepID=T1XLY5_VARPD
luciferase-like monooxygenase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
luciferase-like monooxygenase
13_1_40cm_scaffold_2369_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23866..24738)
DNA (873bp) protein (291aa)
Gluconolactonase (EC:3.1.1.17) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SMP-30/gluconolaconase/LRE domain-containing protein (EC:3.1.1.17)
SMP-30/Gluconolaconase/LRE domain protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IUV5_NOSP7
13_1_40cm_scaffold_2369_27
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24858..25943
DNA (1086bp) protein (362aa)
Basic membrane lipoprotein n=1 Tax=Thermincola potens (strain JR) RepID=D5XD99_THEPJ
basic membrane lipoprotein
Basic membrane lipoprotein {ECO:0000313|EMBL:ADG81747.1}; Flags: Precursor;; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola p
13_1_40cm_scaffold_2369_28
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

25951..27471
DNA (1521bp) protein (507aa)
putative ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] Tax=CSP1_4_Chloroflexi
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI000373E5F2
putative ABC transporter ATP-binding protein
13_1_40cm_scaffold_2369_29
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

27471..28577
DNA (1107bp) protein (369aa)
Nucleoside ABC transporter membrane protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH40_MOOTA
inner-membrane translocator
Nucleoside ABC transporter membrane protein {ECO:0000313|EMBL:ABC20249.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moor
13_1_40cm_scaffold_2369_30
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28574..29497
DNA (924bp) protein (308aa)
Inner-membrane translocator n=1 Tax=Acetonema longum DSM 6540 RepID=F7NDJ6_9FIRM
Inner-membrane translocator {ECO:0000313|EMBL:EGO65858.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.
inner-membrane translocator
Displaying items 1-30 of 39 in total

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