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13_1_40cm_scaffold_2724

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2724_1
unknown

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1..258
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_scaffold_2724_2
unknown

Not on your lists

comp(1064..1231)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_scaffold_2724_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1942..2673)
DNA (732bp) protein (244aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_2724_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2714..3577)
DNA (864bp) protein (288aa)
LysM domain-containing protein 2; K08086 pilus assembly protein FimV Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3824567 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_2724_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3968..4450)
DNA (483bp) protein (161aa)
id=3523877 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_scaffold_2724_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4447..5361)
DNA (915bp) protein (305aa)
GAF sensor-containing diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
GAF/GGDEF domain-containing protein id=4699804 bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GAF/GGDEF domain-containing protein
13_1_40cm_scaffold_2724_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5567..6871
DNA (1305bp) protein (435aa)
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
sigma-54 dependent DNA-binding response regulator id=14626189 bin=bin7_NC10_sister species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
sigma-54-dependent transcriptional response regulator
13_1_40cm_scaffold_2724_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7063..8169
DNA (1107bp) protein (369aa)
Putative uncharacterized protein id=3461025 bin=GWA2_Methylomirabilis_73_35 species=Leishmania mexicana genus=Leishmania taxon_order=Kinetoplastida taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_2724_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8166..9665
DNA (1500bp) protein (500aa)
Response regulator receiver modulated metal dependent phosphohydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Response regulator receiver modulated metal dependent phosphohydrolase id=3461027 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
response regulator
13_1_40cm_scaffold_2724_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9677..10444
DNA (768bp) protein (256aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Methyltransferase type 11 id=3461034 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces hygroscopicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_2724_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

10550..11218
DNA (669bp) protein (223aa)
id=14626493 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
13_1_40cm_scaffold_2724_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11236..11943
DNA (708bp) protein (236aa)
acetyltransferase, ribosomal protein N-acetylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
acetyltransferase id=14626494 bin=bin7_NC10_sister species=Paenibacillus polymyxa genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
acetyltransferase
13_1_40cm_scaffold_2724_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

11952..13592
DNA (1641bp) protein (547aa)
PAS domain S-box id=14626496 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
PAS domain S-box Tax=CSP1_6_Rokubacteria
multi-sensor signal transduction histidine kinase
13_1_40cm_scaffold_2724_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13583..14548
DNA (966bp) protein (322aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4205768 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Displaying 14 items

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