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13_1_40cm_scaffold_2844

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2844_1
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

2..313
DNA (312bp) protein (104aa)
conserved barrel domain protein id=24426716 bin=RBG_19FT_COMBO_GAL15_69_19 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
cupin
cupin Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_2844_2
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

1545..2849
DNA (1305bp) protein (435aa)
Putative ABC-type sugar transport system,periplasmic-binding component n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJ66_9CHLR
Putative ABC-type sugar transport system,periplasmic-binding component {ECO:0000313|EMBL:CCF84728.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacteri
extracellular solute-binding protein
13_1_40cm_scaffold_2844_3
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2932..3795)
DNA (864bp) protein (288aa)
Sugar ABC transporter permease n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G7L0_9PSEU
Sugar ABC transporter permease {ECO:0000313|EMBL:KJK33643.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigen
sugar ABC transporter permease
13_1_40cm_scaffold_2844_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3792..4637)
DNA (846bp) protein (282aa)
Putative ABC transporter permease protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJM3_9BRAD
ABC transporter permease {ECO:0000313|EMBL:KJB97151.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella ae
ABC transporter permease
13_1_40cm_scaffold_2844_5
unknown

Not on your lists

5307..5474
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_scaffold_2844_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5761..6609)
DNA (849bp) protein (283aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=3020066 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar ABC transporter permease
13_1_40cm_scaffold_2844_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6851..7819)
DNA (969bp) protein (323aa)
Binding-protein-dependent transport systems inner membrane component id=2228894 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter permease
13_1_40cm_scaffold_2844_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7823..9109)
DNA (1287bp) protein (429aa)
Putative sugar uptake ABC transporter periplasmic solute-binding protein id=2228895 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
sugar ABC transporter substrate-binding protein
13_1_40cm_scaffold_2844_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9131..10444)
DNA (1314bp) protein (438aa)
Putative sugar uptake ABC transporter periplasmic solute-binding protein id=3709052 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
sugar ABC transporter substrate-binding protein
13_1_40cm_scaffold_2844_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10631..11860)
DNA (1230bp) protein (410aa)
Uncharacterized protein id=2228896 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
membrane protein
13_1_40cm_scaffold_2844_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11878..12963
DNA (1086bp) protein (362aa)
Putative integral membrane protein id=3020048 bin=GWF2_Methylomirabilis_70_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integral membrane protein Tax=GWA2_Rokubacteria_73_35_curated
integral membrane protein
13_1_40cm_scaffold_2844_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12895..13107)
DNA (213bp) protein (71aa)
Major facilitator superfamily MFS_1 id=2228940 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_2844_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13503..14237)
DNA (735bp) protein (245aa)
3-deoxy-D-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] id=14627264 bin=bin7_NC10_sister species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
13_1_40cm_scaffold_2844_14
unknown

Not on your lists

15146..15430
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_scaffold_2844_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15411..16187)
DNA (777bp) protein (259aa)
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.20); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] Tax=GWA2_Rokubacteria_73_35_curated
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.20)
2-dehydro-3-deoxyglucarate aldolase id=2228946 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_2844_16
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

16376..17149
DNA (774bp) protein (258aa)
enoyl-(acyl carrier protein) reductase (EC:1.3.1.9); K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
enoyl-(acyl carrier protein) reductase (EC:1.3.1.9)
enoyl-ACP reductase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4403F
13_1_40cm_scaffold_2844_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17178..18845
DNA (1668bp) protein (556aa)
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] Tax=GWA2_Rokubacteria_70_23_curated
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase id=4892444 bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_2844_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

18967..21609
DNA (2643bp) protein (881aa)
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI000369CF4C
spermine/spermidine synthase family protein
13_1_40cm_scaffold_2844_19
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

21689..22753
DNA (1065bp) protein (355aa)
Alcohol dehydrogenase superfamily, zinc-containing n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RG84_MOOTA
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP69330.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
alcohol dehydrogenase
13_1_40cm_scaffold_2844_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

22746..24335
DNA (1590bp) protein (530aa)
Probable ABC transporter substrate binding protein id=3960026 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter substrate-binding protein
13_1_40cm_scaffold_2844_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

24341..25588
DNA (1248bp) protein (416aa)
imidazolonepropionase; K01468 imidazolonepropionase [EC:3.5.2.7] Tax=GWA2_Rokubacteria_70_23_curated
Imidazolonepropionase HutI id=4892415 bin=GWC2_Methylomirabilis_70_16 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
imidazolonepropionase
13_1_40cm_scaffold_2844_22
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25585..26880
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WCQ0_BACSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHV97530.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae T27.;"
13_1_40cm_scaffold_2844_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

26868..28409
DNA (1542bp) protein (514aa)
hutH; hypothetical protein; K01745 histidine ammonia-lyase [EC:4.3.1.3] Tax=GWA2_Rokubacteria_70_23_curated
Histidine ammonia-lyase id=4631976 bin=GWF2_Methylomirabilis_70_14 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidine ammonia-lyase
13_1_40cm_scaffold_2844_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(28406..29170)
DNA (765bp) protein (255aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626226 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Displaying 24 items

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