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13_1_40cm_scaffold_2905

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2905_1
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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2..1195
DNA (1194bp) protein (398aa)
Heavy metal efflux pump CzcA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8I2_NITMU
czcA; CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
heavy metal efflux pump CzcA
13_1_40cm_scaffold_2905_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1192..2550)
DNA (1359bp) protein (453aa)
cobB; cobyrinic acid a,c-diamide synthase; K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Cobyrinic acid A,C-diamide synthase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JVJ1_DESFR
cobyrinic acid a,c-diamide synthase
13_1_40cm_scaffold_2905_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2547..3677)
DNA (1131bp) protein (377aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] Tax=GWA2_Rokubacteria_
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase id=2810420 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_2905_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3652..4209)
DNA (558bp) protein (186aa)
cobalbumin biosynthesis protein (EC:2.7.7.62); K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_cu
cobalbumin biosynthesis protein (EC:2.7.7.62)
adenosylcobinamide kinase id=2285111 bin=GWA2_Methylomirabilis_73_35 species=Citromicrobium bathyomarinum genus=Citromicrobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_2905_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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4509..5336
DNA (828bp) protein (276aa)
h16_A2129; Zn-dependent hydrolase id=14625954 bin=bin7_NC10_sister species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
h16_A2129; Zn-dependent hydrolase Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_2905_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(5351..5704)
DNA (354bp) protein (118aa)
RNA-binding S4 domain-containing protein; K04762 ribosome-associated heat shock protein Hsp15 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
RNA-binding S4 id=4820065 bin=GWC2_Methylomirabilis_70_16 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hslR; ribosome-associated heat shock protein
13_1_40cm_scaffold_2905_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5929..6603
DNA (675bp) protein (225aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=1709660 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_2905_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6600..7253
DNA (654bp) protein (218aa)
id=14627273 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14627273 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_2905_9
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(7381..8280)
DNA (900bp) protein (300aa)
Binding-protein-dependent transport systems inner membrane component id=4626990 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_16_Armatimonadetes_67_12_curated
dppC2; Dipeptide ABC transporter; permease component
13_1_40cm_scaffold_2905_10
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(8347..9291)
DNA (945bp) protein (315aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=4626993 bin=GWF2_Methylomirabilis_70_14 species=Brevibacillus sp. BC25 genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=RBG_16_Armatimonadetes_67_12_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_scaffold_2905_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9305..9544)
DNA (240bp) protein (80aa)
ABC transporter substrate binding protein (Dipeptide) id=4626997 bin=GWF2_Methylomirabilis_70_14 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate binding protein (dipeptide); K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_2905_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9564..11120)
DNA (1557bp) protein (519aa)
ABC transporter substrate binding protein (dipeptide); K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter substrate binding protein (Dipeptide) id=4626997 bin=GWF2_Methylomirabilis_70_14 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular solute-binding protein family 5
13_1_40cm_scaffold_2905_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11218..11832)
DNA (615bp) protein (205aa)
metal dependent phosphohydrolase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=GWA2_Rokubacteria_73_35_curated
Metal dependent phosphohydrolase id=1709630 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metal dependent phosphohydrolase
13_1_40cm_scaffold_2905_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11811..12557)
DNA (747bp) protein (249aa)
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cobalamin synthase id=1709629 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cobalamin 5'-phosphate synthase
13_1_40cm_scaffold_2905_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12736..12888
DNA (153bp) protein (51aa)
pckG; phosphoenolpyruvate carboxykinase [GTP] (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) (EC:4.1.1.32) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Phosphoenolpyruvate carboxykinase [GTP] id=1709628 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphoenolpyruvate carboxykinase (GTP)
Displaying 15 items

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