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13_1_40cm_scaffold_302

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_302_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..228
DNA (228bp) protein (76aa)
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Efflux transporter, RND family, MFP subunit id=4900365 bin=GWA2_Methylomirabilis_73_35 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RND family efflux transporter MFP subunit
13_1_40cm_scaffold_302_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

225..2540
DNA (2316bp) protein (772aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acriflavin resistance protein id=2855764 bin=GWF2_Methylomirabilis_70_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acriflavin resistance protein
13_1_40cm_scaffold_302_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2492..3349
DNA (858bp) protein (286aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acriflavin resistance protein id=4900369 bin=GWA2_Methylomirabilis_73_35 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acriflavin resistance protein
13_1_40cm_scaffold_302_4
unknown

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3460..3636
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_scaffold_302_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3633..3938
DNA (306bp) protein (102aa)
Uncharacterized protein id=2247854 bin=GWA2_Methylomirabilis_73_35 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_302_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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3935..5044
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003643C37
Uncharacterized protein {ECO:0000313|EMBL:ETX04651.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_scaffold_302_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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5070..6761
DNA (1692bp) protein (564aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036067FB
Uncharacterized protein {ECO:0000313|EMBL:ETX04652.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
binding-protein-dependent transporters inner membrane component
13_1_40cm_scaffold_302_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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6766..7887
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000370F4D1
Uncharacterized protein {ECO:0000313|EMBL:ETX04653.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Putrescine transport ATP-binding protein
13_1_40cm_scaffold_302_9
unknown

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comp(8202..8381)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_scaffold_302_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8555..8938
DNA (384bp) protein (128aa)
UspA domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UspA domain protein id=4099234 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_302_11
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9073..9915
DNA (843bp) protein (281aa)
haloacid dehalogenase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017455B4
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
haloacid dehalogenase
13_1_40cm_scaffold_302_12
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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10192..11241
DNA (1050bp) protein (350aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQZ3_9BACT
Kelch repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_scaffold_302_13
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11286..12113)
DNA (828bp) protein (276aa)
Cyclase family protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGD2_THEM7
Cyclase {ECO:0000313|EMBL:EWT06681.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
cyclase family protein
13_1_40cm_scaffold_302_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12232..13026
DNA (795bp) protein (265aa)
3-oxoacyl-(Acyl-carrier protein) reductase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QES4_9BRAD
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
short-chain dehydrogenase/reductase SDR
13_1_40cm_scaffold_302_15
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13076..14329
DNA (1254bp) protein (418aa)
Extracellular ligand-binding receptor n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QIA8_DESB2
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
extracellular ligand-binding receptor
13_1_40cm_scaffold_302_16
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14682..15317
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RDS7_MYCPH
hypothetical protein; K09967 hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
13_1_40cm_scaffold_302_17
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15326..16204
DNA (879bp) protein (293aa)
Inner-membrane translocator n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QIA7_DESB2
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
inner-membrane translocator
13_1_40cm_scaffold_302_18
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16205..17158
DNA (954bp) protein (318aa)
ABC-type transport system permease protein II n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FHL4_MYCSM
abc06p2; branched-chain/neutral amino acids ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RBG_13_Deltaproteobacteria_52_11b_curated
inner-membrane translocator
13_1_40cm_scaffold_302_19
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17155..17877
DNA (723bp) protein (241aa)
branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_13_Deltaproteobacteria_52_11b_curated
ABC-type branched-chain amino acid transport system, ATPase component id=3434015 bin=GWF2_Methylomirabilis_70_14 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter ATPase
13_1_40cm_scaffold_302_20
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17861..18574
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036FE11D
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
ABC transporter-like protein
13_1_40cm_scaffold_302_21
unknown

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comp(19012..19158)
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_scaffold_302_22
unknown

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comp(19285..19656)
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_40cm_scaffold_302_23
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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20834..21427
DNA (594bp) protein (198aa)
ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002375BF2
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
hypothetical protein
Displaying 23 items

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