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13_1_40cm_scaffold_3348

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3348_1
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..693
DNA (693bp) protein (231aa)
integrin-like repeat-containing protein Tax=RBG_13_Deltaproteobacteria_47_9_curated
Integrin-like repeat protein id=3714492 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_scaffold_3348_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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1335..2228
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BT10_9BACL
ocd2; Ornithine cyclodeaminase 2 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ocd2; Ornithine cyclodeaminase 2
13_1_40cm_scaffold_3348_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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2339..3211
DNA (873bp) protein (291aa)
dlhH; carboxymethylenebutenolidase (EC:3.1.1.45) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Dienelactone hydrolase-like enzyme id=2159104 bin=GWD2_Deltaproteobacteria_55_8 species=Mesorhizobium alhagi genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
carboxymethylenebutenolidase
13_1_40cm_scaffold_3348_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3395..5092)
DNA (1698bp) protein (566aa)
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein id=14631202 bin=bin9_gal15 species=Pseudomonas agarici genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
ABC transporter inner membrane protein
13_1_40cm_scaffold_3348_5
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5100..6116)
DNA (1017bp) protein (339aa)
family 1 extracellular solute-binding protein; K02012 iron(III) transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
Extracellular solute-binding protein family 1 id=1937571 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
family 1 extracellular solute-binding protein
13_1_40cm_scaffold_3348_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6208..7656
DNA (1449bp) protein (483aa)
ubiD2; 4-hydroxybenzoate decarboxylase UbiD (EC:4.1.1.61) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ubiD2; 4-hydroxybenzoate decarboxylase UbiD (EC:4.1.1.61)
3-polyprenyl-4-hydroxybenzoate decarboxylase id=1798648 bin=GWD2_Deltaproteobacteria_55_8 species=Mycobacterium vaccae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_scaffold_3348_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7659..7808
DNA (150bp) protein (50aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
13_1_40cm_scaffold_3348_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7805..8791
DNA (987bp) protein (329aa)
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=1798653 bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Displaying 8 items

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