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13_1_40cm_scaffold_353

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_353_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..584)
DNA (582bp) protein (194aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component (EC:3.6.3.25); K02049 NitT/TauT family transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component (EC:3.6.3.25)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component id=4827661 bin=GWA2_Methylomirabilis_73_35 species=Saccharomonospora viridis genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_353_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(607..1623)
DNA (1017bp) protein (339aa)
Putative Aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein id=4827660 bin=GWA2_Methylomirabilis_73_35 species=Sinorhizobium medicae genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aliphatic sulfonates ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
aliphatic sulfonates ABC transporter substrate-binding protein
13_1_40cm_scaffold_353_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1623..2006)
DNA (384bp) protein (128aa)
Carboxymuconolactone decarboxylase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTA8_ACIC1
peroxidase-like protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
carboxymuconolactone decarboxylase
13_1_40cm_scaffold_353_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2022..2276)
DNA (255bp) protein (85aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
13_1_40cm_scaffold_353_5
unknown

Not on your lists

comp(2726..2854)
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_40cm_scaffold_353_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3290..3550
DNA (261bp) protein (87aa)
Extracellular ligand-binding receptor Tax=GWA2_Rokubacteria_70_23_curated
Extracellular ligand-binding receptor id=4547691 bin=GWF2_Methylomirabilis_70_14 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Extracellular ligand-binding receptor
13_1_40cm_scaffold_353_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3547..4320
DNA (774bp) protein (258aa)
Alpha/beta hydrolase fold Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Alpha/beta hydrolase fold id=2940473 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Alpha/beta hydrolase fold
13_1_40cm_scaffold_353_8
unknown

Not on your lists

4343..4486
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_scaffold_353_9
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4462..4596
DNA (135bp) protein (45aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037AC153
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHD29989.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas den
13_1_40cm_scaffold_353_10
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

4906..5331
DNA (426bp) protein (142aa)
Methyltransferase type 11 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJ94_ANASK
type 11 methyltransferase Tax=RBG_16_Acidobacteria_64_8_curated
methyltransferase
13_1_40cm_scaffold_353_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5312..6196)
DNA (885bp) protein (295aa)
tartronate semialdehyde reductase (EC:1.1.1.60)
Tartronate semialdehyde reductase id=2654120 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Rahnella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
2-hydroxy-3-oxopropionate reductase Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_scaffold_353_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6306..7547)
DNA (1242bp) protein (414aa)
Extracellular ligand-binding receptor id=2654115 bin=GWC2_Methylomirabilis_70_24 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Extracellular ligand-binding receptor Tax=GWA2_Rokubacteria_70_23_curated
Extracellular ligand-binding receptor
13_1_40cm_scaffold_353_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7572..8207)
DNA (636bp) protein (212aa)
isochorismatase hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Isochorismatase hydrolase id=4827652 bin=GWA2_Methylomirabilis_73_35 species=Hoeflea phototrophica genus=Hoeflea taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
isochorismatase hydrolase
13_1_40cm_scaffold_353_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(8204..8839)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00035D4091
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_40cm_scaffold_353_15
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9014..10237
DNA (1224bp) protein (408aa)
Extracellular ligand-binding receptor n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VW52_9BURK
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EGF33166.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae b
Extracellular ligand-binding receptor
13_1_40cm_scaffold_353_16
unknown

Not on your lists

10222..10536
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_scaffold_353_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10533..11903
DNA (1371bp) protein (457aa)
UbiD family decarboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UbiD decarboxylase family protein id=4827625 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UbiD family decarboxylase
13_1_40cm_scaffold_353_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11918..12136
DNA (219bp) protein (73aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627784 bin=bin7_NC10_sister species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_353_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12133..12468
DNA (336bp) protein (112aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UbiD decarboxylase family protein id=4827625 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_353_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12465..14222)
DNA (1758bp) protein (586aa)
rne; ribonuclease E (EC:3.1.4.-)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
protein binding protein id=14626651 bin=bin7_NC10_sister species=Dasypus novemcinctus genus=Dasypus taxon_order=Cingulata taxon_class=Mammalia phylum=Chordata tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_353_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14216..15190)
DNA (975bp) protein (325aa)
Putative uncharacterized protein id=2338962 bin=GWA2_Methylomirabilis_73_35 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Predicted dehydrogenases and related proteins Tax=GWA2_Rokubacteria_73_35_curated
Oxidoreductase
13_1_40cm_scaffold_353_22
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15234..16388
DNA (1155bp) protein (385aa)
propanoyl-CoA C-acyltransferase (EC:2.3.1.176); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=GWC2_Rokubacteria_70_16_curated
propanoyl-CoA C-acyltransferase (EC:2.3.1.176)
Propanoyl-CoA C-acyltransferase id=4813972 bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_353_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16381..16761
DNA (381bp) protein (127aa)
hypothetical protein; K07068 Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=3677765 bin=GWF2_Methylomirabilis_70_14 species=Methanocaldococcus villosus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative nucleic-acid-binding protein
13_1_40cm_scaffold_353_24
R_NC10_66_22, NC10, Bacteria

Not on your lists

16934..18004
DNA (1071bp) protein (357aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein id=14627729 bin=bin7_NC10_sister species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_353_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

18001..19098
DNA (1098bp) protein (366aa)
putative peptidase id=14627730 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
putative peptidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative peptidase
13_1_40cm_scaffold_353_26
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

19086..20186
DNA (1101bp) protein (367aa)
Tetratricopeptide TPR_1 repeat-containing protein id=3087640 bin=GWC2_Methylomirabilis_70_16 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_scaffold_353_27
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

20183..21238
DNA (1056bp) protein (352aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
13_1_40cm_scaffold_353_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21235..22323
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AQQ1_PELPD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_scaffold_353_29
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(22346..24679)
DNA (2334bp) protein (778aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein id=3729544 bin=GWF2_Methylomirabilis_70_14 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
dehydrogenase
13_1_40cm_scaffold_353_30
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(24767..26089)
DNA (1323bp) protein (441aa)
Phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=GWA2_Rokubacteria_73_35_curated
Phenylacetate--CoA ligase id=4585789 bin=GWF2_Methylomirabilis_70_14 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phenylacetate-CoA ligase
Displaying items 1-30 of 42 in total

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