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13_1_40cm_scaffold_3874

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3874_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..770)
DNA (768bp) protein (256aa)
peptidase M24 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M24 id=4367559 bin=GWA2_Methylomirabilis_73_35 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M24
13_1_40cm_scaffold_3874_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1939..2076)
DNA (138bp) protein (46aa)
mercuric reductase; K00520 mercuric reductase [EC:1.16.1.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Mercuric reductase n=1 Tax=Pyrobaculum sp. 1860 RepID=G7VH33_9CREN
mercuric reductase
13_1_40cm_scaffold_3874_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2098..2454)
DNA (357bp) protein (119aa)
Short-chain dehydrogenase/reductase SDR id=4851650 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
short-chain dehydrogenase/reductase SDR Tax=GWA2_Rokubacteria_70_23_curated
short-chain dehydrogenase/reductase SDR
13_1_40cm_scaffold_3874_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2451..3362)
DNA (912bp) protein (304aa)
ParB domain protein nuclease id=4367561 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ParB domain-containing protein nuclease; K03497 chromosome partitioning protein, ParB family Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_3874_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3373..4368)
DNA (996bp) protein (332aa)
ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter permease id=3784118 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease
13_1_40cm_scaffold_3874_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4365..5231)
DNA (867bp) protein (289aa)
ABC transporter permease id=3784117 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease Tax=GWC2_Rokubacteria_70_16_curated
ABC transporter permease
13_1_40cm_scaffold_3874_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5228..5932)
DNA (705bp) protein (235aa)
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter ATP-binding protein id=4851619 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP-binding protein
13_1_40cm_scaffold_3874_8
unknown

Not on your lists

comp(5925..6098)
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_scaffold_3874_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6194..6925)
DNA (732bp) protein (244aa)
ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter ATP-binding protein id=4851618 bin=GWC2_Methylomirabilis_70_24 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP-binding protein
13_1_40cm_scaffold_3874_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7026..8282)
DNA (1257bp) protein (419aa)
ABC transporter ATP-binding protein id=2785121 bin=GWF2_Methylomirabilis_70_14 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter ATP-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter ATP-binding protein
13_1_40cm_scaffold_3874_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8349..8957)
DNA (609bp) protein (203aa)
Thiol methyltransferase 1-like id=4367562 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus elongatus genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiol methyltransferase 1-like protein Tax=GWA2_Rokubacteria_73_35_curated
thiol methyltransferase
13_1_40cm_scaffold_3874_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8945..9103)
DNA (159bp) protein (53aa)
Beta-phosphoglucomutase id=4367563 bin=GWA2_Methylomirabilis_73_35 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HAD family hydrolase Tax=GWA2_Rokubacteria_73_35_curated
Displaying 12 items

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