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13_1_40cm_scaffold_394

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_394_1
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(1..159)
DNA (159bp) protein (53aa)
tag; 3-methyladenine DNA glycosylase; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] id=14623321 bin=bin5_DeltaP species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin5_DeltaP organism_group=Deltaproteobacteria
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_40cm_scaffold_394_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(174..401)
DNA (228bp) protein (76aa)
id=3767291 Tax=GWA2_Rokubacteria_70_23_curated
id=3767291 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_394_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(431..1738)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003741D31
Uncharacterized protein {ECO:0000313|EMBL:ETX07754.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
penicillin amidase family protein
13_1_40cm_scaffold_394_4
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1705..2700)
DNA (996bp) protein (332aa)
penicillin amidase (EC:3.5.1.11)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003741D31
Penicilin amidase {ECO:0000313|EMBL:EJN11273.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR68
13_1_40cm_scaffold_394_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2738..3682)
DNA (945bp) protein (315aa)
2-keto-3-deoxygluconate kinase; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] Tax=GWC2_Rokubacteria_70_16_curated
2-keto-3-deoxygluconate kinase id=3949860 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
2-keto-3-deoxygluconate kinase
13_1_40cm_scaffold_394_6
RBG_19FT_COMBO_Deltaproteobacteria_56_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3682..4464)
DNA (783bp) protein (261aa)
id=3949859 Tax=RBG_19FT_COMBO_Deltaproteobacteria_56_10_curated
id=3949859 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_394_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4606..5850
DNA (1245bp) protein (415aa)
3-oxoacyl-(acyl-carrier-protein) synthase 2; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
3-oxoacyl-(Acyl-carrier-protein) synthase n=1 Tax=planctomycete KSU-1 RepID=I3IIJ7_9PLAN
3-oxoacyl-(acyl-carrier-protein) synthase 2
13_1_40cm_scaffold_394_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5856..8351
DNA (2496bp) protein (832aa)
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
multi-sensor signal transduction histidine kinase id=14626871 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
multi-sensor signal transduction histidine kinase
13_1_40cm_scaffold_394_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9089..10897
DNA (1809bp) protein (603aa)
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Multi-sensor signal transduction histidine kinase id=4492784 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multi-sensor signal transduction histidine kinase
13_1_40cm_scaffold_394_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10894..12855
DNA (1962bp) protein (654aa)
multi-sensor signal transduction histidine kinase Tax=GWA2_Rokubacteria_73_35_curated
multi-sensor signal transduction histidine kinase id=14626870 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
multi-sensor signal transduction histidine kinase
13_1_40cm_scaffold_394_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12852..15161
DNA (2310bp) protein (770aa)
Histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3)
Putative Histidine kinase id=4097828 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_394_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15188..16021
DNA (834bp) protein (278aa)
amidohydrolase 2; K07046 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
amidohydrolase 2 id=4217943 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase 2
13_1_40cm_scaffold_394_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16168..16599
DNA (432bp) protein (144aa)
CBS domain containing protein id=5011108 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_394_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16645..17001
DNA (357bp) protein (119aa)
hypothetical protein id=3398315 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_394_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17001..18014
DNA (1014bp) protein (338aa)
periplasmic serine protease (EC:3.4.21.-)
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein id=14428754 bin=bin3_NC10 species=Methanoculleus bourgensis genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin3_NC10 organism_group=NC10
13_1_40cm_scaffold_394_16
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

18436..18903
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Candida albicans (strain SC5314 / ATCC MYA-2876) RepID=Q5AJ88_CANAL
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_40cm_scaffold_394_17
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19368..20666)
DNA (1299bp) protein (433aa)
Possible type I phosphodiesterase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CFW3_9PLAN
Possible type I phosphodiesterase {ECO:0000313|EMBL:EDL56423.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris D
hypothetical protein
13_1_40cm_scaffold_394_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20671..21033)
DNA (363bp) protein (121aa)
BH0390 protein n=1 Tax=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) RepID=Q9KFT7_BACHD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_scaffold_394_19
unknown

Not on your lists

21118..21402
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_scaffold_394_20
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(21386..22288)
DNA (903bp) protein (301aa)
phosphoadenosine phosphosulfate reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
phosphoadenosine phosphosulfate reductase id=14626864 bin=bin7_NC10_sister species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
phosphoadenosine phosphosulfate reductase
13_1_40cm_scaffold_394_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22297..22491)
DNA (195bp) protein (65aa)
hypothetical protein; K03154 sulfur carrier protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Thiamine biosynthesis protein ThiS id=4492888 bin=GWA2_Methylomirabilis_73_35 species=Thermus scotoductus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative thiamine biosynthesis protein ThiS
13_1_40cm_scaffold_394_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22875..23435
DNA (561bp) protein (187aa)
NUDIX hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NUDIX hydrolase id=4492889 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase
13_1_40cm_scaffold_394_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(23445..24224)
DNA (780bp) protein (260aa)
Putative uncharacterized protein id=3960150 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transmembrane anti-sigma factor Tax=GWA2_Rokubacteria_73_35_curated
Conserved putative membrane protein
13_1_40cm_scaffold_394_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(24221..24772)
DNA (552bp) protein (184aa)
RNA polymerase sigma factor, sigma-70 family protein id=3960152 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_73_35_curated
RNA polymerase sigma factor SigK
13_1_40cm_scaffold_394_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(24920..26194)
DNA (1275bp) protein (425aa)
paaK; phenylacetate-CoA ligase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Phenylacetate-CoA ligase id=4124058 bin=GWC2_Methylomirabilis_70_24 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
paaK; phenylacetate-CoA ligase
13_1_40cm_scaffold_394_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(26225..27775)
DNA (1551bp) protein (517aa)
Benzoate-CoA ligase family n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMS4_9FIRM
benzoate-CoA ligase family Tax=GWA2_Rokubacteria_73_35_curated
benzoate-CoA ligase family
13_1_40cm_scaffold_394_27
unknown

Not on your lists

27851..28288
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_scaffold_394_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(28292..28774)
DNA (483bp) protein (161aa)
enodribonuclease L-PSP n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262650F
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_scaffold_394_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(28793..30214)
DNA (1422bp) protein (474aa)
boxB; benzoyl-CoA oxygenase component B; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Benzoyl-CoA oxygenase component B (BoxB) n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JJH8_BURP8
boxB; benzoyl-CoA oxygenase subunit B
13_1_40cm_scaffold_394_30
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(30214..31887)
DNA (1674bp) protein (558aa)
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17); K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] id=14627885 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17); K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] Tax=CSP1_6_Rokubacteria
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17)
Displaying items 1-30 of 77 in total

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