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13_1_40cm_scaffold_4057

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_4057_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1..327
DNA (327bp) protein (109aa)
56kDa selenium binding protein (SBP56) n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8N0_SINAD
56kDa selenium binding protein (SBP56)
56kDa selenium binding protein (SBP56) {ECO:0000313|EMBL:AGA24986.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Sin
13_1_40cm_scaffold_4057_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(1176..2306)
DNA (1131bp) protein (377aa)
histone deacetylase/AcuC/AphA family protein id=14626707 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
histone deacetylase/AcuC/AphA family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
histone deacetylase/AcuC/AphA family protein
13_1_40cm_scaffold_4057_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2303..2830)
DNA (528bp) protein (176aa)
moaC; molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
moaC; molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C id=14626706 bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
moaC; molybdenum cofactor biosynthesis protein C
13_1_40cm_scaffold_4057_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2856..3077)
DNA (222bp) protein (74aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626705 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_4057_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3234..4331)
DNA (1098bp) protein (366aa)
Tungsten transporter ATP binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tungsten transporter ATP binding protein id=3639789 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tungsten transporter ATP binding protein
13_1_40cm_scaffold_4057_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(4328..5446)
DNA (1119bp) protein (373aa)
putative ABC transporter ATP-binding protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative ABC transporter ATP-binding protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29] id=14626702 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
putative ABC transporter ATP-binding protein
13_1_40cm_scaffold_4057_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(5451..6104)
DNA (654bp) protein (218aa)
ABC transporter permease; K02018 molybdate transport system permease protein id=14626700 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease; K02018 molybdate transport system permease protein Tax=CSP1_6_Rokubacteria
ABC transporter permease
13_1_40cm_scaffold_4057_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6107..6865)
DNA (759bp) protein (253aa)
putative ABC transporter substrate binding protein; K02020 molybdate transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative ABC transporter substrate binding protein; K02020 molybdate transport system substrate-binding protein id=14626699 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
putative ABC transporter substrate binding protein
13_1_40cm_scaffold_4057_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6865..7560)
DNA (696bp) protein (232aa)
binding-protein-dependent transporters inner membrane component; K05773 tungstate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC-type tungstate transport permease protein id=2315318 bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type tungstate transport permease protein
13_1_40cm_scaffold_4057_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7557..8393)
DNA (837bp) protein (279aa)
ABC-type tungstate transport system permease component-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC-type tungstate transport system permease component-like protein id=2315320 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type tungstate transport system permease component-like protein
13_1_40cm_scaffold_4057_11
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8473..8673)
DNA (201bp) protein (67aa)
Alpha/beta hydrolase fold n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TYR9_9BRAD
Alpha/beta hydrolase fold {ECO:0000313|EMBL:CCE11607.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
Alpha/beta hydrolase fold protein
13_1_40cm_scaffold_4057_12
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(8717..10162)
DNA (1446bp) protein (482aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Aldehyde Dehydrogenase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MJ64_9BACT
NAD-dependent aldehyde dehydrogenase
13_1_40cm_scaffold_4057_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(10192..11541)
DNA (1350bp) protein (450aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase id=2315328 bin=GWA2_Methylomirabilis_73_35 species=Megasphaera micronuciformis genus=Megasphaera taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
arnT; undecaprenyl phosphate--lipid A 4-amino-4-deoxy-L-arabinose transferase Tax=GWA2_Rokubacteria_73_35_curated
glycosyl transferase family 39
13_1_40cm_scaffold_4057_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11589..13187)
DNA (1599bp) protein (533aa)
N-acyl-D-amino-acid deacylase (EC:3.5.1.81); K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
d-aminoacylase id=2315330 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
D-aminoacylase
13_1_40cm_scaffold_4057_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13192..13626)
DNA (435bp) protein (145aa)
Peptidyl-prolyl cis-trans isomerase id=2315332 bin=GWA2_Methylomirabilis_73_35 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidyl-prolyl cis-trans isomerase Tax=GWA2_Rokubacteria_73_35_curated
peptidyl-prolyl cis-trans isomerase
13_1_40cm_scaffold_4057_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13638..14171)
DNA (534bp) protein (178aa)
ppiB; peptidylprolyl isomerase (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=GWA2_Rokubacteria_73_35_curated
Peptidyl-prolyl cis-trans isomerase id=2315334 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidyl-prolyl cis-trans isomerase
Displaying 16 items

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