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13_1_40cm_scaffold_51

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_51_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

58..1083
DNA (1026bp) protein (342aa)
glycosyl transferase group 1 protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=3859437 bin=GWF2_Methylomirabilis_70_14 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase group 1 protein
13_1_40cm_scaffold_51_2
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

1152..2327
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034CE652
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1 Tax=RBG_16_NC10_65_8_curated
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1
13_1_40cm_scaffold_51_3
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2340..3209
DNA (870bp) protein (290aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9FJY1_9CYAN
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:EKV03168.1}; Flags: Precursor;; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales
inner-membrane translocator
13_1_40cm_scaffold_51_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3206..4978
DNA (1773bp) protein (591aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V424_9BRAD
branched chain amino acid family ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:EFI52704.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
13_1_40cm_scaffold_51_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5028..5762
DNA (735bp) protein (245aa)
amino acid ABC transporter ATPase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036D4F84
ABC transporter related protein {ECO:0000313|EMBL:KFC66856.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter
13_1_40cm_scaffold_51_6
unknown

Not on your lists

comp(5759..5971)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_scaffold_51_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6162..6551
DNA (390bp) protein (130aa)
regulatory protein, FmdB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative regulatory protein, FmdB id=4119982 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
regulatory protein, FmdB
13_1_40cm_scaffold_51_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

6675..7661
DNA (987bp) protein (329aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Uncharacterized protein id=3960018 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_51_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7658..8911
DNA (1254bp) protein (418aa)
group 1 glycosyl transferase; K15521 D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative glycosyltransferase id=4177827 bin=GWC2_Methylomirabilis_70_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
group 1 glycosyl transferase
13_1_40cm_scaffold_51_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9114..10112
DNA (999bp) protein (333aa)
glutathione import ATP-binding protein GsiA (EC:3.6.3.-)
Putative ABC transporter id=3960022 bin=GWA2_Methylomirabilis_73_35 species=uncultured marine microorganism HF4000_010I05 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_51_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

10109..11089
DNA (981bp) protein (327aa)
oligopeptide transport ATP-binding protein AppF-like Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Uncharacterized protein id=3960025 bin=GWA2_Methylomirabilis_73_35 species=Amphimedon queenslandica genus=Amphimedon taxon_order=Haplosclerida taxon_class=Demospongiae phylum=Porifera tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_scaffold_51_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11169..12761
DNA (1593bp) protein (531aa)
Probable ABC transporter substrate binding protein id=3960026 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter substrate-binding protein
13_1_40cm_scaffold_51_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12788..13741
DNA (954bp) protein (318aa)
Putative peptide ABC transporter permease protein id=4119975 bin=GWF2_Methylomirabilis_70_14 species=uncultured marine bacterium MedDCM-OCT-S11-C95 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gsiC; glutathione transport system permease GsiC; K02033 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
gsiC; glutathione transport system permease GsiC
13_1_40cm_scaffold_51_14
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13934..14857
DNA (924bp) protein (308aa)
uncharacterized LOC100637730 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
uncharacterized LOC100637730 id=14626483 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
glutathione transport system permease GsiD
13_1_40cm_scaffold_51_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14967..15233
DNA (267bp) protein (89aa)
ferredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
7Fe ferredoxin id=14626484 bin=bin7_NC10_sister species=Microlunatus phosphovorus genus=Microlunatus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
fdxA; ferredoxin
13_1_40cm_scaffold_51_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15411..15689
DNA (279bp) protein (93aa)
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator Tax=GWA2_Rokubacteria_73_35_curated
Sigma-54 dependent transcriptional regulator, Fis family id=3992856 bin=GWC2_Methylomirabilis_70_24 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_51_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15888..16940
DNA (1053bp) protein (351aa)
Acetyl-CoA acetyltransferase-like protein; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=GWA2_Rokubacteria_73_35_curated
Acetyl-CoA acetyltransferase-like protein id=3960112 bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Acetyl-CoA acetyltransferase-like protein
13_1_40cm_scaffold_51_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

16937..17368
DNA (432bp) protein (144aa)
id=14626487 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
id=14626487 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_51_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

17352..18548
DNA (1197bp) protein (399aa)
CaiB/BaiF family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
L-carnitine dehydratase/bile acid-inducible protein F id=3960114 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
CaiB/BaiF family protein
13_1_40cm_scaffold_51_20
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(18484..19368)
DNA (885bp) protein (295aa)
Aldo/keto reductase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AS1_SOLUE
aldo/keto reductase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
aldo/keto reductase
13_1_40cm_scaffold_51_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19365..19580)
DNA (216bp) protein (72aa)
Putative uncharacterized protein id=2811811 bin=GWC2_Methylomirabilis_70_24 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_scaffold_51_22
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

19760..21274
DNA (1515bp) protein (505aa)
alpha-isopropylmalate/homocitrate synthase family transferase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
2-isopropylmalate synthase/homocitrate synthase family protein id=3960116 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cimA; alpha-isopropylmalate/homocitrate synthase family transferase
13_1_40cm_scaffold_51_23
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

21285..21650
DNA (366bp) protein (122aa)
response regulator receiver protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
response regulator receiver protein id=14626491 bin=bin7_NC10_sister species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
response regulator receiver protein
13_1_40cm_scaffold_51_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(21714..22175)
DNA (462bp) protein (154aa)
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
Putative uncharacterized protein id=3960122 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_51_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(22205..22627)
DNA (423bp) protein (141aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
GCN5-related N-acetyltransferase id=3960125 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_51_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(22651..23484)
DNA (834bp) protein (278aa)
alpha/beta hydrolase fold protein Tax=GWA2_Rokubacteria_73_35_curated
Alpha/beta hydrolase fold protein id=3960128 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase fold protein
13_1_40cm_scaffold_51_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(23484..24161)
DNA (678bp) protein (226aa)
putative transferase protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Probable transferase protein id=4424806 bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative transferase protein
13_1_40cm_scaffold_51_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(24205..24903)
DNA (699bp) protein (233aa)
Tetratricopeptide TPR_2 id=3960130 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_51_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(24920..25891)
DNA (972bp) protein (324aa)
Kelch repeat-containing protein id=3960133 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Kelch repeat-containing protein Tax=GWA2_Rokubacteria_73_35_curated
Kelch repeat-containing protein
13_1_40cm_scaffold_51_30
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(25888..27900)
DNA (2013bp) protein (671aa)
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ligA; DNA ligase (Polydeoxyribonucleotide synthase [NAD+]) (EC:6.5.1.2)
DNA ligase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHF2_9BACT
Displaying items 1-30 of 40 in total

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