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13_1_40cm_scaffold_714

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_714_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(2..190)
DNA (189bp) protein (63aa)
hypothetical protein; K09990 hypothetical protein id=14626945 bin=bin7_NC10_sister species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K09990 hypothetical protein Tax=CSP1_6_Rokubacteria
Protein of unknown function DUF2086
13_1_40cm_scaffold_714_2
unknown

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comp(187..339)
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_scaffold_714_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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381..2408
DNA (2028bp) protein (676aa)
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=GWA2_Rokubacteria_70_23_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) id=4534565 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_714_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2405..4438
DNA (2034bp) protein (678aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FAQ3_VERMA
5-oxoprolinase
13_1_40cm_scaffold_714_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(4817..5572)
DNA (756bp) protein (252aa)
beta-lactamase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Beta-lactamase family protein id=5015982 bin=GWA2_Methylomirabilis_73_35 species=Thiomicrospira crunogena genus=Thiomicrospira taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
beta-lactamase
13_1_40cm_scaffold_714_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5918..7081
DNA (1164bp) protein (388aa)
fadE; acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWA2_Rokubacteria_73_35_curated
Acyl-CoA dehydrogenase id=5015980 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces sp. e14 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_714_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7269..7700
DNA (432bp) protein (144aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_scaffold_714_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7660..9387
DNA (1728bp) protein (576aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_scaffold_714_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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9384..10001
DNA (618bp) protein (206aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=8266865 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
13_1_40cm_scaffold_714_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10210..10593
DNA (384bp) protein (128aa)
spo0F; stage 0 sporulation protein F (EC:2.7.3.-); K02490 two-component system, response regulator, stage 0 sporulation protein F Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sporulation initiation phosphotransferase F (Stage 0 sporulation protein F) id=3461031 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
atoC; sporulation initiation phosphotransferase f
13_1_40cm_scaffold_714_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10603..11397
DNA (795bp) protein (265aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Methyltransferase type 11 id=3461034 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces hygroscopicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphatidylethanolamine N-methyltransferase
13_1_40cm_scaffold_714_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11400..12176
DNA (777bp) protein (259aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64); K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] Tax=RIFCSPLOWO2_02_FULL_Rok
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64); K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] id=14626492 bin=bin7_NC10_sister species=Nocardiopsis halophila genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
ubiquinone biosynthesis O-methyltransferase
13_1_40cm_scaffold_714_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12285..12980
DNA (696bp) protein (232aa)
acetyltransferase, ribosomal protein N-acetylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
acetyltransferase id=14626494 bin=bin7_NC10_sister species=Paenibacillus polymyxa genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
acetyltransferase
13_1_40cm_scaffold_714_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12967..15120
DNA (2154bp) protein (718aa)
putative two-component hybrid sensor and regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative two-component hybrid sensor and regulator id=14626495 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=bin7_NC10_sister organism_group=NC10
putative two-component hybrid sensor and regulator
13_1_40cm_scaffold_714_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15117..20639
DNA (5523bp) protein (1841aa)
histidine kinase (EC:2.7.13.3)
multi-sensor signal transduction histidine kinase Tax=GWA2_Rokubacteria_70_23_curated
Multi-sensor hybrid histidine kinase id=2650861 bin=GWF2_Methylomirabilis_70_14 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_714_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20623..21165)
DNA (543bp) protein (181aa)
PA-phosphatase-like phosphoesterase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Phosphoesterase PA-phosphatase related protein id=4166555 bin=GWA2_Methylomirabilis_73_35 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
membrane-associated phosphatase
Displaying 16 items

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