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13_1_40cm_scaffold_746

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_746_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2..1636
DNA (1635bp) protein (545aa)
GTP-binding protein TypA/BipA id=2315338 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
typA; GTP-binding protein TypA/BipA; K06207 GTP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
GTP-binding protein TypA
13_1_40cm_scaffold_746_2
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1825..2655
DNA (831bp) protein (277aa)
RNA methyltransferase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B6321E
RNA methylase
Putative RNA methylase {ECO:0000313|EMBL:ADH86897.1}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibr
13_1_40cm_scaffold_746_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2834..3127
DNA (294bp) protein (98aa)
id=14627339 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
id=14627339 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_scaffold_746_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3260..4135
DNA (876bp) protein (292aa)
N-carbamoyl-D-amino acid hydrolase (EC:3.5.1.77); K01459 [EC:3.5.1.77] Tax=GWA2_Rokubacteria_73_35_curated
N-carbamyl-D-amino acid amidohydrolase id=3821876 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
N-carbamoyl-D-amino acid hydrolase
13_1_40cm_scaffold_746_5
unknown

Not on your lists

comp(4167..4343)
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_scaffold_746_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4344..4541)
DNA (198bp) protein (66aa)
id=14430174 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
13_1_40cm_scaffold_746_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4566..5510)
DNA (945bp) protein (315aa)
Putative uncharacterized protein id=2589431 bin=GWA2_Methylomirabilis_73_35 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_746_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5931..6641
DNA (711bp) protein (237aa)
glutamine-fructose-6-phosphate transaminase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
glutamine-fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine-fructose-6-phosphate transaminase (Isomerizing) id=1866170 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_746_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6638..8032)
DNA (1395bp) protein (465aa)
rhlB; ATP-dependent RNA helicase RhlB; K03732 ATP-dependent RNA helicase RhlB [EC:3.6.4.13] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DEAD/DEAH box helicase domain protein id=4663773 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DEAD/DEAH box helicase
13_1_40cm_scaffold_746_10
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8238..9878)
DNA (1641bp) protein (547aa)
acetolactate synthase large subunit (EC:2.2.1.6) Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
Acetolactate synthase n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NGT4_GLOVI
ilvB; acetolactate synthase
13_1_40cm_scaffold_746_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9904..10659)
DNA (756bp) protein (252aa)
Sec-independent protein translocase protein TatC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Sec-independent protein translocase protein TatC id=1866211 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Sec-independent protein translocase protein TatC
13_1_40cm_scaffold_746_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10666..11454)
DNA (789bp) protein (263aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=GWA2_Rokubacteria_73_35_curated
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] id=14625252 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
phosphomethylpyrimidine kinase
13_1_40cm_scaffold_746_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11545..12249)
DNA (705bp) protein (235aa)
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] id=14625253 bin=bin7_NC10_sister species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
uroporphyrin-III C/tetrapyrrole methyltransferase
13_1_40cm_scaffold_746_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12389..13636)
DNA (1248bp) protein (416aa)
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX id=1866218 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_746_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13662..14297)
DNA (636bp) protein (212aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit id=4942504 bin=GWC2_Methylomirabilis_70_16 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_746_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14374..15642)
DNA (1269bp) protein (423aa)
trigger factor; K03545 trigger factor Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
trigger factor; K03545 trigger factor id=14625256 bin=bin7_NC10_sister species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
trigger factor
13_1_40cm_scaffold_746_trna_1
unknown

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comp(15675..15759)
DNA (85bp)
transferRNA
13_1_40cm_scaffold_746_17
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15964..16425
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B6D76B
Uncharacterized protein {ECO:0000313|EMBL:KFI97329.1}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschens
cell wall or antigenic protein (fragment) signal peptide
13_1_40cm_scaffold_746_18
unknown

Not on your lists

comp(16518..16715)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_scaffold_746_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

17103..17399
DNA (297bp) protein (99aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
gas vesicle protein GVPa Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Gas vesicle structural protein
13_1_40cm_scaffold_746_20
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17913..18224
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0X6_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EES51495.1}; TaxID=412449 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;
13_1_40cm_scaffold_746_21
Leptospirillum sp. Group II '5-way CG', Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

18230..19261
DNA (1032bp) protein (344aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6APN6_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ39222.1}; TaxID=419541 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group II '5-way
hypothetical protein
13_1_40cm_scaffold_746_22
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

19251..20084
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6APN5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIA31782.1}; TaxID=1441628 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum YSK.;"
13_1_40cm_scaffold_746_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20174..21460)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PLZ9_9BRAD
major facilitator superfamily permease Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
major facilitator superfamily permease
13_1_40cm_scaffold_746_24
unknown

Not on your lists

comp(21614..21703)
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 25 items

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