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13_1_40cm_scaffold_793

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_793_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3..569)
DNA (567bp) protein (189aa)
metal-binding integral membrane protein-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
metal-binding transmembrane protein id=14627813 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_793_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

830..1660
DNA (831bp) protein (277aa)
hypothetical protein; K07083 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Hypothetical conserved protein id=4781405 bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative periplasmic solute-binding protein
13_1_40cm_scaffold_793_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1844..2917)
DNA (1074bp) protein (358aa)
radical SAM protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2837977 bin=GWC2_Methylomirabilis_70_24 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_scaffold_793_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2917..3996)
DNA (1080bp) protein (360aa)
menaquinone biosynthesis protein, family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative menaquinone biosynthesis protein, family id=2837809 bin=GWC2_Methylomirabilis_70_24 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
radical SAM domain-containing protein
13_1_40cm_scaffold_793_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4137..4670
DNA (534bp) protein (178aa)
DctQ5: TRAP dicarboxylate transporter, presursor id=2413350 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dctQ5; TRAP dicarboxylate transporter, presursor DctQ5 Tax=GWA2_Rokubacteria_73_35_curated
C4-dicarboxylate transporter small subunit
13_1_40cm_scaffold_793_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4670..6004
DNA (1335bp) protein (445aa)
TRAP dicarboxylate transporter, DctM subunit id=4741734 bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TRAP dicarboxylate transporter subunit DctM Tax=GWC2_Rokubacteria_70_16_curated
TRAP dicarboxylate transporter, DctM subunit
13_1_40cm_scaffold_793_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6127..7218)
DNA (1092bp) protein (364aa)
C4-dicarboxylate transporter substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component id=4537033 bin=GWF2_Methylomirabilis_70_14 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
C4-dicarboxylate transporter substrate-binding protein
13_1_40cm_scaffold_793_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7321..7770
DNA (450bp) protein (150aa)
Uncharacterized protein id=2413348 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
MaoC-related acyl dehydratase
13_1_40cm_scaffold_793_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7760..8200
DNA (441bp) protein (147aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=4620319 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_793_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8197..9870
DNA (1674bp) protein (558aa)
ilvD; dihydroxy-acid dehydratase (DAD) (EC:4.2.1.9) Tax=GWA2_Rokubacteria_73_35_curated
ilvD; dihydroxy-acid dehydratase (DAD) (EC:4.2.1.9)
Dihydroxy-acid dehydratase id=2413346 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_793_11
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10085..10672)
DNA (588bp) protein (196aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP56920.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
13_1_40cm_scaffold_793_12
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10711..11814)
DNA (1104bp) protein (368aa)
Histidine kinase HAMP region domain protein id=1859209 bin=GWB2_Desulfobacterales_56_26 species=Thiorhodococcus drewsii genus=Thiorhodococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation
13_1_40cm_scaffold_793_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(11947..12309)
DNA (363bp) protein (121aa)
Putative Chemotaxis regulator CheY n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGH6_9BACT
putative chemotaxis regulator CheY; K02658 twitching motility two-component system response regulator PilH Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative chemotaxis regulator CheY
13_1_40cm_scaffold_793_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13077..13214)
DNA (138bp) protein (46aa)
hypothetical protein; K13571 proteasome accessory factor A [EC:6.3.2.-] id=14627261 bin=bin7_NC10_sister species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
pafA; proteasome accessory factor PafA (EC:6.3.2.-) Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
Displaying 14 items

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