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13_1_40cm_scaffold_826

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_826_1
CSP1_5_NC10, NC10, Bacteria

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comp(2..967)
DNA (966bp) protein (322aa)
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=CSP1_5_NC10
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] id=14430255 bin=bin3_NC10 species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin3_NC10 organism_group=NC10
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
13_1_40cm_scaffold_826_2
unknown

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972..1259
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_scaffold_826_3
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1494..1880)
DNA (387bp) protein (129aa)
Endoribonuclease L-PSP n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RYK7_9BURK
Endoribonuclease L-PSP {ECO:0000313|EMBL:EHP44698.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilen
endoribonuclease L-PSP
13_1_40cm_scaffold_826_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(1918..2670)
DNA (753bp) protein (251aa)
Succinate dehydrogenase subunit B (EC:1.3.5.1)
Succinate dehydrogenase subunit B {ECO:0000313|EMBL:CBE69042.1}; EC=1.3.5.1 {ECO:0000313|EMBL:CBE69042.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" sour
Succinate dehydrogenase subunit B n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH11_9BACT
13_1_40cm_scaffold_826_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2670..4469)
DNA (1800bp) protein (600aa)
sdhA; Succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] id=14430250 bin=bin3_NC10 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
sdhA; Succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
13_1_40cm_scaffold_826_6
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(4678..5466)
DNA (789bp) protein (263aa)
integral membrane protein id=14430249 bin=bin3_NC10 species=Streptomyces sp. BoleA5 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
integral membrane protein Tax=CSP1_5_NC10
integral membrane protein
13_1_40cm_scaffold_826_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5600..6100)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRW2_KORVE
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein
13_1_40cm_scaffold_826_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6124..6474)
DNA (351bp) protein (117aa)
frdD; Fumarate reductase subunit D (EC:1.3.99.1) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
frdD; Fumarate reductase subunit D (EC:1.3.99.1)
fumarate reductase subunit D id=14430252 bin=bin3_NC10 species=Kribbella catacumbae genus=Kribbella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
13_1_40cm_scaffold_826_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6482..6898)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000362BCA9
fumarate reductase subunit C Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
frdC; fumarate reductase subunit C
13_1_40cm_scaffold_826_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(6895..7635)
DNA (741bp) protein (247aa)
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1) id=14631498 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1)
13_1_40cm_scaffold_826_11
R_NC10_66_22, NC10, Bacteria

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comp(7642..9384)
DNA (1743bp) protein (581aa)
frdA; Putative fumarate reductase [flavoprotein subunit] FrdA (fumarate dehydrogenase) (fumaric hydrogenase) (EC:1.3.99.1) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
frdA; Putative fumarate reductase [flavoprotein subunit] FrdA (fumarate dehydrogenase) (fumaric hydrogenase) (EC:1.3.99.1)
fumarate reductase flavoprotein subunit n=1 Tax=Kribbella catacumbae RepID=UPI00035C6254
13_1_40cm_scaffold_826_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9421..10194)
DNA (774bp) protein (258aa)
succinate dehydrogenase/fumarate reductase iron-sulfur subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
succinate dehydrogenase/fumarate reductase iron-sulfur subunit (EC:1.3.99.1)
Succinate dehydrogenase subunit B n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVX2_ROSS1
13_1_40cm_scaffold_826_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10191..12146)
DNA (1956bp) protein (652aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=GWA2_Rokubacteria_73_35_curated
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit id=3986863 bin=GWA2_Methylomirabilis_73_35 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_826_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12187..12867)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037DC828
succinate dehydrogenase/fumarate reductase cytochrome b subunit; K00241 succinate dehydrogenase cytochrome b556 subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
succinate dehydrogenase/fumarate reductase cytochrome b subunit
13_1_40cm_scaffold_826_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(12864..13454)
DNA (591bp) protein (197aa)
fumarate hydratase, class I; K01678 fumarate hydratase subunit beta [EC:4.2.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta (EC:4.2.1.2)
Fe-S type hydro-lyase tartrate/fumarate beta region id=4681013 bin=GWC2_Methylomirabilis_70_16 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_826_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(13795..14637)
DNA (843bp) protein (281aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2); K01677 fumarate hydratase subunit alpha [EC:4.2.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2); K01677 fumarate hydratase subunit alpha [EC:4.2.1.2] id=14626419 bin=bin7_NC10_sister species=Desulfurobacterium sp. TC5-1 genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin7_NC10_sister organism_group=NC10
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2)
13_1_40cm_scaffold_826_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(14642..15121)
DNA (480bp) protein (160aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021R7_SOLUE
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABJ84308.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;
13_1_40cm_scaffold_826_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(15136..16101)
DNA (966bp) protein (322aa)
malate dehydrogenase, NAD-dependent; K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
mdh; malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase id=3859633 bin=GWF2_Methylomirabilis_70_14 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_826_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16174..17436)
DNA (1263bp) protein (421aa)
icd; isocitrate dehydrogenase (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
icd; isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] id=3986855 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_826_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(17436..19775)
DNA (2340bp) protein (780aa)
acnA; aconitate hydratase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
acnA; aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase id=3986857 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_826_21
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(19889..20578)
DNA (690bp) protein (230aa)
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.99.1); K00245 fumarate reductase iron-sulfur subunit [EC:1.3.99.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.99.1)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein id=4740796 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_826_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(20637..21536)
DNA (900bp) protein (300aa)
haloalkane dehalogenase; K01563 haloalkane dehalogenase [EC:3.8.1.5] Tax=GWA2_Rokubacteria_73_35_curated
Alpha/beta hydrolase fold protein id=1746149 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
haloalkane dehalogenase
13_1_40cm_scaffold_826_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(21592..21933)
DNA (342bp) protein (114aa)
succinate dehydrogenase, hydrophobic anchor subunit (EC:1.3.5.1) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
succinate dehydrogenase, hydrophobic anchor subunit (EC:1.3.5.1)
Succinate dehydrogenase, hydrophobic anchor subunit id=2836312 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 23 items

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