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13_1_40cm_scaffold_1222

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1222_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3..164)
DNA (162bp) protein (54aa)
Peptide chain release factor id=3665312 bin=GWC2_Methylomirabilis_70_16 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_scaffold_1222_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

201..1925
DNA (1725bp) protein (575aa)
adenine deaminase; K01486 adenine deaminase [EC:3.5.4.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
adenine deaminase (EC:3.5.4.2)
Adenine deaminase id=3884412 bin=GWF2_Methylomirabilis_70_14 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_1222_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1939..4011
DNA (2073bp) protein (691aa)
hypothetical membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Esterase, PHB depolymerase family id=3986302 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium populi genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
membrane protein
13_1_40cm_scaffold_1222_4
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4141..5445
DNA (1305bp) protein (435aa)
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Putative uncharacterized protein id=2259308 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1222_5
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5447..6385
DNA (939bp) protein (313aa)
hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Binding-protein-dependent transport systems inner membrane component id=2259310 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
13_1_40cm_scaffold_1222_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6388..7248
DNA (861bp) protein (287aa)
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Binding-protein-dependent transport systems inner membrane component id=2259312 bin=GWA2_Methylomirabilis_73_35 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner membrane ABC transporter permease YcjP
13_1_40cm_scaffold_1222_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7365..8972
DNA (1608bp) protein (536aa)
ABC transporter peptide-binding protein id=3884414 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter peptide-binding protein
13_1_40cm_scaffold_1222_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

9058..10011
DNA (954bp) protein (318aa)
peptide ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Peptide ABC transporter permease protein id=3884416 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter permease
13_1_40cm_scaffold_1222_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10001..10918
DNA (918bp) protein (306aa)
Peptide ABC transporter permease protein id=4775215 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
peptide ABC transporter permease
13_1_40cm_scaffold_1222_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10950..12368
DNA (1419bp) protein (473aa)
aldehyde-dehydrogenase-like protein y4uC (EC:1.2.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
aldehyde-dehydrogenase-like protein y4uC (EC:1.2.1.-)
Putative aldehyde-dehydrogenase-like protein y4uC n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIR4_9BACT
13_1_40cm_scaffold_1222_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12380..13798
DNA (1419bp) protein (473aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amidase id=3884420 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidase
13_1_40cm_scaffold_1222_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

13963..14178
DNA (216bp) protein (72aa)
Putative uncharacterized protein id=4599608 bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
Displaying 12 items

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