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13_1_40cm_scaffold_132

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_132_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3..215
DNA (213bp) protein (71aa)
arsenate reductase like protein
ArsC family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ArsC family protein id=5020381 bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_132_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

324..611
DNA (288bp) protein (96aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=GWC2_Rokubacteria_70_16_curated
Carboxymethylenebutenolidase id=4712286 bin=GWC2_Methylomirabilis_70_16 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_132_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1016..1405)
DNA (390bp) protein (130aa)
hypothetical protein id=14628067 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_132_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1455..2393)
DNA (939bp) protein (313aa)
Thioesterase superfamily protein id=5020384 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Thioesterase superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_132_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2425..3573
DNA (1149bp) protein (383aa)
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member Tax=GWA2_Rokubacteria_73_35_curated
Putative transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member id=4165967 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transport protein, belonging to the Major Facilitator Superfamily, of which narK is a member
13_1_40cm_scaffold_132_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3697..4212
DNA (516bp) protein (172aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=5020386 bin=GWA2_Methylomirabilis_73_35 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_132_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4217..5158
DNA (942bp) protein (314aa)
26S proteasome subunit P45 family (EC:3.6.4.3) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Proteasome-activating nucleotidase id=4165965 bin=GWF2_Methylomirabilis_70_14 species=Thermosphaera aggregans genus=Thermosphaera taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pan; proteasome-activating nucleotidase
13_1_40cm_scaffold_132_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5168..5587
DNA (420bp) protein (140aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4830683 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
4-hydroxybenzoyl-CoA thioesterase
13_1_40cm_scaffold_132_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5618..6601
DNA (984bp) protein (328aa)
ABC transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter related id=4165962 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
13_1_40cm_scaffold_132_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6598..7365
DNA (768bp) protein (256aa)
multi-copper enzyme maturation ABC transporter permease Tax=GWA2_Rokubacteria_73_35_curated
multi-copper enzyme maturation ABC transporter permease id=14626740 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
multi-copper enzyme maturation ABC transporter permease
13_1_40cm_scaffold_132_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7367..8920
DNA (1554bp) protein (518aa)
gliding motility ABC transporter auxillary protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like id=4034167 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gliding motility ABC transporter auxillary protein
13_1_40cm_scaffold_132_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8925..10691
DNA (1767bp) protein (589aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626738 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_132_13
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(10705..11670)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI000373E5D0
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein
13_1_40cm_scaffold_132_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11750..12448
DNA (699bp) protein (233aa)
Beta-lactamase-like Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Beta-lactamase-like id=4034158 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Beta-lactamase-like
13_1_40cm_scaffold_132_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12465..13208)
DNA (744bp) protein (248aa)
Short-chain dehydrogenase/reductase SDR id=4034156 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase, short chain dehydrogenase/reductase family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
short-chain dehydrogenase/reductase SDR
13_1_40cm_scaffold_132_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13218..13823
DNA (606bp) protein (202aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=14626734 bin=bin7_NC10_sister species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_132_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13782..14462)
DNA (681bp) protein (227aa)
Alpha/beta hydrolase family protein id=4034153 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase Tax=GWA2_Rokubacteria_73_35_curated
alpha/beta hydrolase
13_1_40cm_scaffold_132_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14507..14992
DNA (486bp) protein (162aa)
hypothetical protein id=4034151 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_scaffold_132_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(15129..16022)
DNA (894bp) protein (298aa)
Tol-Pal system YbgF id=14626730 bin=bin7_NC10_sister species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin7_NC10_sister organism_group=NC10
Tol-Pal system YbgF Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_132_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16037..16636)
DNA (600bp) protein (200aa)
OmpA/MotB domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
OmpA/MotB domain protein id=4034147 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidoglycan-binding outer membrane lipoprotein Pal, OmpA family
13_1_40cm_scaffold_132_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16683..18011)
DNA (1329bp) protein (443aa)
tolB protein; K03641 TolB protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
WD40 domain-containing protein; K03641 TolB protein id=14626728 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
biopolymer transport TolB-like protein
13_1_40cm_scaffold_132_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18018..18818)
DNA (801bp) protein (267aa)
TonB family protein Tax=GWA2_Rokubacteria_73_35_curated
TonB family protein id=4034141 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_132_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(18835..19263)
DNA (429bp) protein (143aa)
tolR; protein TolR; K03560 biopolymer transport protein TolR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
tolR; protein TolR; K03560 biopolymer transport protein TolR id=14626726 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
exbD; Biopolymer transport protein exbD
13_1_40cm_scaffold_132_24
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(19253..19972)
DNA (720bp) protein (240aa)
tolQ; TolQ protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
tolQ protein; K03562 biopolymer transport protein TolQ id=14626725 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
MotA/TolQ/ExbB proton channel
13_1_40cm_scaffold_132_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20022..20810
DNA (789bp) protein (263aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=2773093 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_132_26
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

20811..21494
DNA (684bp) protein (228aa)
beta-lactamase domain-containing protein; K00784 ribonuclease Z [EC:3.1.26.11] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Beta-lactamase domain protein id=4489512 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
beta-lactamase domain-containing protein
13_1_40cm_scaffold_132_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(21602..22174)
DNA (573bp) protein (191aa)
DNA-3-methyladenine glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative 3-methyladenine DNA glycosylase id=2773084 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA-3-methyladenine glycosylase
13_1_40cm_scaffold_132_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(22174..23403)
DNA (1230bp) protein (410aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Threonine synthase ThrC id=4165888 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
threonine synthase
13_1_40cm_scaffold_132_29
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(23400..24431)
DNA (1032bp) protein (344aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2817611 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_132_30
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(24517..25443)
DNA (927bp) protein (309aa)
dihydroorotate dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=2773068 bin=GWA2_Methylomirabilis_73_35 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dihydroorotate dehydrogenase
Displaying items 1-30 of 31 in total

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