ggKbase home page

13_1_40cm_scaffold_142_34

Organism: 13_1_40CM_Rokubacteria_69_27

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 ASCG 14 / 38
Location: 37558..37758

Top 3 Functional Annotations

Value Algorithm Source
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 66.0
  • Bit_score: 131
  • Evalue 4.40e-28
Cold-shock DNA-binding domain protein id=2785126 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 67.0
  • Bit_score: 121
  • Evalue 3.30e-25
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 66.0
  • Bit_score: 116
  • Evalue 3.00e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_69_13 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 201
ATGGCACAAGGTCGAGTAAAGTGGTTCAACGATGCGAAGGGCTACGGGTTCATCACGCAGGACGGCGGTGAGGACGTCTTCGTCCACTACAGCGCCATCCAGGGCAACGGCTTCAAGAGCCTAGCGGAGGGCGACACTGTCGAGTTCGAGGTGACGCGCGGCCCAAAGGGTCTTCAGGCGGCCAACGTCCGGAAAGTCTGA
PROTEIN sequence
Length: 67
MAQGRVKWFNDAKGYGFITQDGGEDVFVHYSAIQGNGFKSLAEGDTVEFEVTRGPKGLQAANVRKV*