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13_1_40cm_scaffold_407_24

Organism: 13_1_40CM_Rokubacteria_69_27

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 ASCG 14 / 38
Location: 23107..24030

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 304.0
  • Bit_score: 433
  • Evalue 1.90e-118
pseudouridine synthase id=4608907 bin=GWC2_Methylomirabilis_70_24 species=Sporolactobacillus inulinus genus=Sporolactobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 308.0
  • Bit_score: 372
  • Evalue 3.80e-100
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 299.0
  • Bit_score: 297
  • Evalue 5.70e-78

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 924
GTGGGGGAGCGGCGGCTGGAGGTCGCGCGGGCGGCGGCCGGCACGCGGCTCGACCGCTGGCTCGCCGCCGCGATCCCGGAGCTGTCCCGCGTGAAGGTCCGGGAGGCGATCGACGCCGGCCGCGTGCGCGTCGCCGGCGCGGTCCGCAAGGCGTCGCATCGCCTGCGGGGGGGCGAGACGATCGACGTCGACATTCCGCCGCCTCCGCCGGAGGAGCTCCAGGCCGAACCGATCGCGCTCCGGATCCTCTCCGAGGACGAGCACGTCCTCGTCGTGGACAAGCCGTCCGGCATGGTGGTGCACCCGGGCGCCGGCCATGCGCGCGGCACCCTGGCCGCCGCCGTGCTCGCCCACGCGCCCGGCACGGCGGGCGTCGGCGGCCCGCGGCGTCCCGGCGTCGTTCACCGCCTGGACAAGGGCACGTCGGGGCTGCTGGTCATCGCCAAGACGTCGACGGCCTACGACGCGCTGATCGCCCAGCTCGCCGCGCGCACCGTCGGCCGCCGCTACCTGGCGATCGTCCAGGGGCGCGTCGGGCCCAACGAGGGCGTGATCGATGCCCCGATCGGGCGCGACCCGCGCCACCGCCAGCGCATGGCGATCCGACCGGCGGGCAGGGGCAAGCGCGCCGTGACCCGCTACCGCGTCCTGGAGCGTTTCGTCCAGTTCACTTTCCTCGAGGTGAGGCTCGAGACCGGCCGGACGCACCAGATCCGCGTCCACCTGGCATCGCTCGGGCATCCCGTCGCCGGCGACGACACCTATGGCCGTGCGAGACCGCCGATCCCCTTCGAGGGTCTGGCGCTCCACGCGGCGGAGCTGGCGTTCGTGCATCCGATTACTCAAGAACGGATGGAATTCTCTGCCTCCTTGCCGCCACGGATGGAGCGATTGCTTTCCCACTTACGACACACCCGCCGCTGA
PROTEIN sequence
Length: 308
VGERRLEVARAAAGTRLDRWLAAAIPELSRVKVREAIDAGRVRVAGAVRKASHRLRGGETIDVDIPPPPPEELQAEPIALRILSEDEHVLVVDKPSGMVVHPGAGHARGTLAAAVLAHAPGTAGVGGPRRPGVVHRLDKGTSGLLVIAKTSTAYDALIAQLAARTVGRRYLAIVQGRVGPNEGVIDAPIGRDPRHRQRMAIRPAGRGKRAVTRYRVLERFVQFTFLEVRLETGRTHQIRVHLASLGHPVAGDDTYGRARPPIPFEGLALHAAELAFVHPITQERMEFSASLPPRMERLLSHLRHTRR*