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13_1_40cm_scaffold_564_4

Organism: 13_1_40CM_Rokubacteria_69_27

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 ASCG 14 / 38
Location: comp(2888..3268)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 126.0
  • Bit_score: 239
  • Evalue 2.90e-60
30S ribosomal protein S12 id=3836486 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 127.0
  • Bit_score: 234
  • Evalue 5.10e-59
rpsL; 30S ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 123.0
  • Bit_score: 221
  • Evalue 1.20e-55

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGCCGACCATTAACCAACTCGTTCGCCTGGGCCGCCGAGCGGTGCGGAAGAAGTCGAAGACGCCCGCGATGCAGGGGTGTCCGCAGAAGCGGGGCGTTTGCATCCGCGTGTACACCACCACGCCGAAGAAACCGAACTCGGCGCTCCGCAAGGTGGCCCGCGTGCGGCTGACGAACGGGCTGGAGGTGACCTCGTACATCCCCGGGGTCGGTCATAACTTGCAGGAGCACTCGATCGTGATGATCCGCGGCGGCCGTGTCAAGGATCTGCCGGGCGTGCGCTATCACATCATCCGCGGCACGCTCGACACGGCCGGGGTGGCCAACCGAAAGCAGAGCCGCTCGAAGTACGGCATGAAGGCGCCCAAGGCCGGAGCCTAA
PROTEIN sequence
Length: 127
MPTINQLVRLGRRAVRKKSKTPAMQGCPQKRGVCIRVYTTTPKKPNSALRKVARVRLTNGLEVTSYIPGVGHNLQEHSIVMIRGGRVKDLPGVRYHIIRGTLDTAGVANRKQSRSKYGMKAPKAGA*