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13_1_40cm_scaffold_564_9

Organism: 13_1_40CM_Rokubacteria_69_27

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 ASCG 14 / 38
Location: comp(12608..13324)

Top 3 Functional Annotations

Value Algorithm Source
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 236.0
  • Bit_score: 402
  • Evalue 4.80e-109
50S ribosomal protein L1 id=3447243 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 233.0
  • Bit_score: 381
  • Evalue 4.80e-103
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 227.0
  • Bit_score: 307
  • Evalue 3.30e-81

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGGCAACGGTGGTCGGCAAGCGCTACGACCGCGCGGCGGCGATGCTGGAAGCCGGGCGGGAGTATTCGGTCGAGGAGGCCATGCGCCTCCTCAAGGAGATGCCGGGCACGAAGTTCGACGAGACCGTCGACCTGTCGTTCCGGCTGGGCGTGGACCCCAAGCACGCCGACCAGATGGTGCGGGGGGCCGTGGTGCTGCCCCACGGCATCGGCAAGAGCGTCCGGGTGGCGGTCTTCGCCAAGGGTGAAAAGGAGCGGGAGGCCCGTGAGGCCGGCGCGGACATCGTGGGCGCCGAGGATCTCGTCGAGAAGATCCAGGGCGGCTCGATCGAGTTCGACACGACGATCGCCACGCCGGACCTCATGGGTCAGGTCGGCCGCCTGGGCAAGATCCTCGGGCCGCGCGGCCTGATGCCGAATCCCAAGCTGGGCACGGTGACCTTCGACATCGCCCGCGCCGTACGGGAGGCGAAGGCGGGCAAGGTGGAGTTCCGCGTCGACAAGGCGGGCAACGTGCACGTGCCGATCGGCAAGCGCTCGTTCCCGGCCGAGCACCTCATCGCCAACGCGCTGGCCTTGATCGAGGCGATCGTCCGGGCCAAGCCGGCCTCCGCCAAGGGCACGTACCTCCGGTCCCTCACGGTGTCGACCACGATGGGGCCGGGCATCACCATCGACGCGCAACGCACGGCCAATCTGTTCAAGAAGCAGACCTAA
PROTEIN sequence
Length: 239
MATVVGKRYDRAAAMLEAGREYSVEEAMRLLKEMPGTKFDETVDLSFRLGVDPKHADQMVRGAVVLPHGIGKSVRVAVFAKGEKEREAREAGADIVGAEDLVEKIQGGSIEFDTTIATPDLMGQVGRLGKILGPRGLMPNPKLGTVTFDIARAVREAKAGKVEFRVDKAGNVHVPIGKRSFPAEHLIANALALIEAIVRAKPASAKGTYLRSLTVSTTMGPGITIDAQRTANLFKKQT*