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13_1_40cm_scaffold_1331

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1331_1
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

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176..541
DNA (366bp) protein (122aa)
mac:MA3368 sensory transduction histidine kinase id=1242395 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
sensory transduction histidine kinase Tax=RBG_13_Chloroflexi_51_36_curated
PAS sensor protein
13_1_40cm_scaffold_1331_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(774..1424)
DNA (651bp) protein (217aa)
id=4342176 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4342176 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_scaffold_1331_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1706..1846
DNA (141bp) protein (47aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_scaffold_1331_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2610..3728
DNA (1119bp) protein (373aa)
major facilitator transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Major facilitator superfamily transporter id=4307493 bin=GWC2_Methylomirabilis_70_16 species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sugar (and other) transporter family protein
13_1_40cm_scaffold_1331_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3728..4831
DNA (1104bp) protein (368aa)
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein id=14625100 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter
13_1_40cm_scaffold_1331_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5074..5838)
DNA (765bp) protein (255aa)
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative beta-lactamase-like protein id=4780187 bin=GWA2_Methylomirabilis_73_35 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metallo-beta-lactamase superfamily protein
13_1_40cm_scaffold_1331_7
unknown

Not on your lists

6089..6685
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_40cm_scaffold_1331_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6734..8815
DNA (2082bp) protein (694aa)
guanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative transmembrane sensor domain protein id=2227968 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
guanylate cyclase
13_1_40cm_scaffold_1331_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8858..9529
DNA (672bp) protein (224aa)
methyltransferase cognate corrinoid protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methyltransferase cognate corrinoid protein id=14625094 bin=bin7_NC10_sister species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
methyltransferase cognate corrinoid protein
13_1_40cm_scaffold_1331_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9526..10440
DNA (915bp) protein (305aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Homocysteine S-methyltransferase id=4780181 bin=GWA2_Methylomirabilis_73_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1331_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10533..11138
DNA (606bp) protein (202aa)
Vitamin B12 dependent methionine synthase activation region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Vitamin B12 dependent methionine synthase id=4780179 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Vitamin B12 dependent methionine synthase activation region
13_1_40cm_scaffold_1331_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11193..11528
DNA (336bp) protein (112aa)
enoyl-CoA hydratase/isomerase (EC:4.2.1.55)
Enoyl-CoA dehydratase EchA8_3 id=4547814 bin=GWC2_Methylomirabilis_70_24 species=Mycobacterium sp. genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
echA8_3; enoyl-CoA dehydratase EchA8_3 Tax=GWA2_Rokubacteria_70_23_curated
Displaying 12 items

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