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13_1_40cm_scaffold_14882

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_14882_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

123..371
DNA (249bp) protein (83aa)
phage integrase family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
phage integrase protein (DNA breaking and rejoining enzyme)
Phage integrase protein (DNA breaking and rejoining enzyme) id=4701568 bin=GWC2_Methylomirabilis_70_24 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_scaffold_14882_trna_4
unknown

Not on your lists

comp(469..553)
DNA (85bp)
transferRNA
13_1_40cm_scaffold_14882_2
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

788..1339
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0ES40_9NOCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT99853.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
13_1_40cm_scaffold_14882_3
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1409..1861
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8R485_9BURK
Aldehyde dehydrogenase {ECO:0000313|EMBL:KAK44700.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiang
putative uncharacterized protein
13_1_40cm_scaffold_14882_4
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1874..3256)
DNA (1383bp) protein (461aa)
NAD(P)-dependent succinate-semialdehyde dehydrogenase n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZQK5_PSEAC
Aldehyde dehydrogenase {ECO:0000313|EMBL:KIG17136.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
short-chain dehydrogenase/reductase SDR
13_1_40cm_scaffold_14882_5
unknown

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comp(3302..3505)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_scaffold_14882_6
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4151..5611
DNA (1461bp) protein (487aa)
Mate efflux family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4N2_9BURK
mate efflux family protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
mate efflux family protein
13_1_40cm_scaffold_14882_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5605..5937)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031E8EDD
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
13_1_40cm_scaffold_14882_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6019..6363)
DNA (345bp) protein (115aa)
SupD n=1 Tax=Aplysina aerophoba bacterial symbiont clone pAPKS18 RepID=A4U8R4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETX07424.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_1_40cm_scaffold_14882_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6621..8498
DNA (1878bp) protein (626aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B id=3435283 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_14882_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8508..9608
DNA (1101bp) protein (367aa)
top6A; DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
top6A; DNA topoisomerase VI subunit A (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit A n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEY5_9BACT
13_1_40cm_scaffold_14882_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9630..10439)
DNA (810bp) protein (270aa)
Na+/H+ antiporter n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMX7_9BACT
Na+/H+ antiporter {ECO:0000313|EMBL:EEF58773.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;"
sodium/proton antiporter
13_1_40cm_scaffold_14882_12
unknown

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11245..11358
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_40cm_scaffold_14882_trna_3
unknown

Not on your lists

comp(11292..11364)
DNA (73bp)
transferRNA
13_1_40cm_scaffold_14882_trna_2
unknown

Not on your lists

comp(11392..11465)
DNA (74bp)
transferRNA
13_1_40cm_scaffold_14882_trna_1
unknown

Not on your lists

comp(11487..11560)
DNA (74bp)
transferRNA
13_1_40cm_scaffold_14882_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11585..12487)
DNA (903bp) protein (301aa)
dTDP-4-dehydrorhamnose reductase id=4950928 bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dTDP-4-dehydrorhamnose reductase Tax=GWC2_Rokubacteria_70_16_curated
dTDP-4-dehydrorhamnose reductase
13_1_40cm_scaffold_14882_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12499..13290)
DNA (792bp) protein (264aa)
fabG4; 3-oxoacyl-ACP reductase (EC:1.1.1.100) Tax=GWA2_Rokubacteria_73_35_curated
Short-chain dehydrogenase/reductase SDR id=3435260 bin=GWA2_Methylomirabilis_73_35 species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
13_1_40cm_scaffold_14882_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13326..13826)
DNA (501bp) protein (167aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_14882_16
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(13810..14421)
DNA (612bp) protein (204aa)
Transport-associated n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZMA1_OPITP
transport-associated
Transport-associated {ECO:0000313|EMBL:ACB73354.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain D
13_1_40cm_scaffold_14882_17
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14418..14822)
DNA (405bp) protein (135aa)
Manganese and iron superoxide dismutase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBL1_ANADF
manganese and iron superoxide dismutase
Manganese and iron superoxide dismutase {ECO:0000313|EMBL:ABS26107.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaer
Displaying 21 items

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