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13_1_40cm_scaffold_1517

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1517_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1..1257)
DNA (1257bp) protein (419aa)
dehydrogenase, E1 component; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=GWA2_Rokubacteria_70_23_curated
Dehydrogenase E1 component id=4009634 bin=GWC2_Methylomirabilis_70_24 species=Mesorhizobium metallidurans genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dehydrogenase, E1 component
13_1_40cm_scaffold_1517_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1325..1975
DNA (651bp) protein (217aa)
AroM protein id=3859585 bin=GWF2_Methylomirabilis_70_14 species=Anaerobaculum hydrogeniformans genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K14591 protein AroM Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_scaffold_1517_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2104..3420)
DNA (1317bp) protein (439aa)
hydantoinase A Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Hydantoinase A id=4565333 bin=GWC2_Methylomirabilis_70_24 species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hydantoinase A
13_1_40cm_scaffold_1517_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3638..4720)
DNA (1083bp) protein (361aa)
hypothetical protein; K09703 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4565334 bin=GWC2_Methylomirabilis_70_24 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Protein of hypothetical function DUF917
13_1_40cm_scaffold_1517_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4809..6389
DNA (1581bp) protein (527aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J2K8Q2_9RHIZ
dppAch2; ABC transporter, substrate-binding protein (Dipeptide) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ddpA; Putative D,D-dipeptide-binding periplasmic protein DdpA
13_1_40cm_scaffold_1517_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6394..7407
DNA (1014bp) protein (338aa)
Binding-protein-dependent transport systems inner membrane component domain protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U4H5_9PROT
ddpB; putative D,D-dipeptide transport system permease protein ddpB; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
D-Ala-D-Ala transporter subunit
13_1_40cm_scaffold_1517_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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7404..8312
DNA (909bp) protein (303aa)
cytochrome C550 n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375A72
dppC8; peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
yddQ; Inner membrane ABC transporter permease protein YddQ
13_1_40cm_scaffold_1517_8
unknown

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8636..8992
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_scaffold_1517_9

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9005..10111
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000373327D
Uncharacterized protein {ECO:0000313|EMBL:AGU01666.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_scaffold_1517_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(10113..10871)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363E12B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85897.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_scaffold_1517_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10887..11933)
DNA (1047bp) protein (349aa)
biotin carboxylase-like Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Biotin carboxylase-like protein id=4290030 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_1517_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12119..12418)
DNA (300bp) protein (100aa)
nitrogen-fixing NifU domain-containing protein; K07400 Fe/S biogenesis protein NfuA Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Nitrogen fixation protein NifU id=4012736 bin=GWF2_Methylomirabilis_70_14 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nitrogen-fixing NifU domain-containing protein
13_1_40cm_scaffold_1517_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12535..13551)
DNA (1017bp) protein (339aa)
Radical SAM domain protein id=4539028 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Radical SAM domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
radical SAM domain-containing protein
Displaying 13 items

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