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13_1_40cm_scaffold_1538

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1538_1
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1..1014
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003741C12
nirA; nitrite reductase
Nitrite reductase {ECO:0000313|EMBL:ACO33815.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51
13_1_40cm_scaffold_1538_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1033..1446)
DNA (414bp) protein (138aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
gas vesicle protein GvpA
Gas vesicle structural protein {ECO:0000255|HAMAP-Rule:MF_00576}; Short=GVP {ECO:0000255|HAMAP-Rule:MF_00576};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
13_1_40cm_scaffold_1538_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1596..2291)
DNA (696bp) protein (232aa)
ABC transporter-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter related id=4827655 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter ATPase
13_1_40cm_scaffold_1538_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2284..3033)
DNA (750bp) protein (250aa)
ABC transporter permease protein id=3033655 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family Tax=GWA2_Rokubacteria_70_23_curated
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
13_1_40cm_scaffold_1538_5
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3030..4853)
DNA (1824bp) protein (608aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367495D
Uncharacterized protein {ECO:0000313|EMBL:GAO35354.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
hypothetical protein
13_1_40cm_scaffold_1538_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4857..5843)
DNA (987bp) protein (329aa)
ABC-type transporter, integral membrane subunit id=4547723 bin=GWF2_Methylomirabilis_70_14 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid ABC transporter Tax=GWA2_Rokubacteria_70_23_curated
amino acid ABC transporter
13_1_40cm_scaffold_1538_7
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5840..6697)
DNA (858bp) protein (286aa)
amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=RBG_16_Deltaproteobacteria_48_10_curated
Amino acid/amide ABC transporter membrane protein 1, HAAT family id=2654094 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid/amide ABC transporter membrane protein 1, HAAT family
13_1_40cm_scaffold_1538_8
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6694..7287)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI00036E1A6B
isochorismatase
Isochorismatase {ECO:0000313|EMBL:AIQ65060.1}; TaxID=169760 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus stellifer.;"
13_1_40cm_scaffold_1538_9
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7284..8411)
DNA (1128bp) protein (376aa)
Flavin-dependent oxidoreductase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZL69_9PLAN
Flavin-dependent oxidoreductase {ECO:0000313|EMBL:EAQ82502.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopir
luciferase-like monooxygenase
13_1_40cm_scaffold_1538_10
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8437..9213)
DNA (777bp) protein (259aa)
Alpha/beta hydrolase fold protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R546_PIRSD
2-hydroxymuconic semialdehyde hydrolase
2-hydroxymuconic semialdehyde hydrolase {ECO:0000313|EMBL:CDN50870.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorh
13_1_40cm_scaffold_1538_11
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9195..10394)
DNA (1200bp) protein (400aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F9E5_DESDL
amino acid ABC transporter substrate-binding protein
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:AGA70449.1}; Flags: Precursor;; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoco
13_1_40cm_scaffold_1538_12
unknown

Not on your lists

comp(10787..11329)
DNA (543bp) protein (181aa)

This feature has no annotations

13_1_40cm_scaffold_1538_13
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13068..13478)
DNA (411bp) protein (137aa)
Cupin domain-containing protein n=1 Tax=Polaromonas sp. CF318 RepID=J3D568_9BURK
Cupin domain-containing protein {ECO:0000313|EMBL:EJL84934.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" s
hypothetical protein
13_1_40cm_scaffold_1538_14
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(13488..14480)
DNA (993bp) protein (331aa)
RbsB; periplasmic sugar-binding proteins; K10439 ribose transport system substrate-binding protein Tax=RBG_16_NC10_65_8_curated
Monosaccharide-transporting ATPase id=4827676 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RbsB; periplasmic sugar-binding proteins
13_1_40cm_scaffold_1538_15
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(14482..15399)
DNA (918bp) protein (306aa)
ribose ABC transporter permease; K10440 ribose transport system permease protein Tax=RBG_16_NC10_65_8_curated
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter id=4827675 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator
13_1_40cm_scaffold_1538_16
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(15396..15617)
DNA (222bp) protein (74aa)
putative ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] Tax=RBG_16_NC10_65_8_curated
Putative ABC transporter ATP-binding protein id=4827674 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein
13_1_40cm_scaffold_1538_17
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(16073..16870)
DNA (798bp) protein (266aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XS97_9BACT
oxidoreductase Tax=RBG_16_NC10_65_8_curated
short-chain dehydrogenase/reductase SDR
13_1_40cm_scaffold_1538_18
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16973..17776
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q143V9_BURXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE29380.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenov
13_1_40cm_scaffold_1538_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17809..18297
DNA (489bp) protein (163aa)
Transcriptional regulator, MarR family id=2855590 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional regulator, MarR family Tax=GWA2_Rokubacteria_70_23_curated
transcriptional regulator, MarR family
13_1_40cm_scaffold_1538_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18294..19466
DNA (1173bp) protein (391aa)
Efflux transporter, RND family, MFP subunit id=4900365 bin=GWA2_Methylomirabilis_73_35 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA Tax=GWA2_Rokubacteria_73_35_curated
RND family efflux transporter MFP subunit
13_1_40cm_scaffold_1538_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19609..22707
DNA (3099bp) protein (1033aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=GWA2_Rokubacteria_73_35_curated
Acriflavin resistance protein id=2855764 bin=GWF2_Methylomirabilis_70_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acriflavin resistance protein
13_1_40cm_scaffold_1538_22
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

22714..23175
DNA (462bp) protein (154aa)
hypothetical protein; K09117 hypothetical protein id=14625991 bin=bin7_NC10_sister species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K09117 hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_1538_23
unknown

Not on your lists

23198..23416
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_scaffold_1538_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23397..23906
DNA (510bp) protein (170aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_1538_25
Chlamydia pneumoniae, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(23907..24533)
DNA (627bp) protein (209aa)
PqqC-like protein {ECO:0000313|EMBL:CRI51938.1}; TaxID=83558 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia pneumoniae (Chlam
13_1_40cm_scaffold_1538_26
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24530..25084)
DNA (555bp) protein (185aa)
Appr-1-p processing domain protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CMT6_DESK7
Appr-1-p processing domain-containing protein
Appr-1-p processing domain-containing protein Tax=CG_Delta_01
13_1_40cm_scaffold_1538_27
Afipia birgiae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25205..25501
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036CCE75
13_1_40cm_scaffold_1538_28
Afipia birgiae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25505..26551
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036CCE75
13_1_40cm_scaffold_1538_29
R_NC10_66_22, NC10, Bacteria

Not on your lists

26592..27410
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031E5F76
ABC-type sugar transport systems, permease component Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC-type sugar transport systems, permease component
13_1_40cm_scaffold_1538_30
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27410..28306
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D83A86
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EIF35386.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;
ABC-type sugar transport systems, permease component
Displaying items 1-30 of 52 in total

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